Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2590 |
Symbol | |
ID | 4920896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3056013 |
End bp | 3056642 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164184 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001094715 |
Protein GI | 127513518 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCC CATTAGCTAA CCAGGTGGAC TACCGTGAGC AACATAAGCA GCGCCTGGCC TACATGCCCT GGCTCTACTT CTCCTTGAAG CCCAAACATC TCGTCTGGGC CAAGCCCTGG CAGGATGAGG TGCAGCAAGC GCTGATGAGC GTTGAAACCG TGAGCATAGG TAAGGAGTGC TTTATCGCGC CCCAGGCGAA ACTGTTTGCC GAACCGGGCC GGGATATCCT CATAGGTGAT CGCTGCATGA TCGCCGCCGA CAGCTTTCTG CACGGCCCCA TCGTCATGGG TAACGAGGTG GCTATCAATC ATGGCTGCTC CCTGGACGGC GGGCGCGGCA AGATAGTGAT TGGCGATCAG ACCCGCATCG CCAACAATGT CACCATCTAC GCCTTCAACC ACGGCATGCA CCCGGACACG CCGATATATC AGCAGAGCAG TCAGTCGAAG GGGATCGTCA TAGGCAGAGA TGTGTGGATC GGCGCCCAGG CGGGGATAGT CGATGGGGTG ACCATAGGTG ACTGCGCCGT GATCGGCATG GGCTGTATCG TCACCAAAGA TGTGCCCGAC TACGCCATCG TCGCCGGTAA TCCAGCCCGC ATCATAGGCG ACAGGCGCGA TAAGAAATAA
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Protein sequence | MQTPLANQVD YREQHKQRLA YMPWLYFSLK PKHLVWAKPW QDEVQQALMS VETVSIGKEC FIAPQAKLFA EPGRDILIGD RCMIAADSFL HGPIVMGNEV AINHGCSLDG GRGKIVIGDQ TRIANNVTIY AFNHGMHPDT PIYQQSSQSK GIVIGRDVWI GAQAGIVDGV TIGDCAVIGM GCIVTKDVPD YAIVAGNPAR IIGDRRDKK
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