| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2583 |
|---|
| Symbol | |
|---|
| ID | 4920889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3047596 |
|---|
| End bp | 3048519 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640164177 |
|---|
| Product | electron transfer flavoprotein, alpha subunit |
|---|
| Protein accession | YP_001094708 |
|---|
| Protein GI | 127513511 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000711397 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTC TAGTAATAGC AGAACATGAT AATGCGACTT TAAAACTCGA TACCGCCAAG
GTTGTGGCTT GTGCCCAGGC TATCGGCAGC GAAGTCGATG TACTGGTAGC CGGTCATAAC
TGTGGCGCCG CGGCCGATAG CGCCAAGCAG CTTGCCGGTG TACGTCAGGT ACTGGTTGCC
GATAGCGGCG TTTATGCCAA TGCCATCGCC GAAAACCTGT CACAGCTGAT CGTCTCAGTG
GCCAGCGAGT ATCAACACAT TCTGGCTGCG GCTTCAAGCG TAGGTAAAGA TGTGCTGCCT
CGTGTGGCGG CGCTTCTGGA TGTGGCGCAG CTTTCTGAAG TGGTCGAAGT GGTGAGCGAA
GACACCTTCG TGCGTCCTAT CTATGCCGGT AGCGCCATGG CGACGGTTCA GAGCCTGGAT
AACATCAAGG TGATGACGGT TCGTGCCAGC GCCTTCGATG CGGTAGCCCA GGACGGTAGC
GCCTCGGTGC AGACCCTAGA CAACGAATAT AGCGGCGATG TTGAGTTTGT AACTCAGACT
CTGTCAGTGT CTGAGCGTCC AGATCTAGGC GCCGCTTCAG TAGTGGTTTC AGGTGGCCGC
GCCATGGGCA GCGCCGAGAA TTTCGCGATT CTCGAGCAGC TTGCCGATAA GCTGGGCGGG
GCACTGGGTG CATCGCGCGC CGCGGTCGAT GCCGGTTACG TGCCAAACGA TCTACAGGTT
GGTCAGACGG GTAAGATTGT CGCGCCGGAT CTCTATATCG CCGTGGGTAT CTCGGGTGCC
ATCCAGCACC TTGCGGGGAT GAAAGATTCT AAGGTGATCG TGGCGATCAA CAAAGATCCA
GAGGCGCCTA TCTTCCAGGT AGCCGACTAT GGTCTGGAAG CGGATCTGTT CGAGGCGGTG
CCTAAGCTAC TCGAACTTCT TTAA
|
|---|
| Protein sequence | MAILVIAEHD NATLKLDTAK VVACAQAIGS EVDVLVAGHN CGAAADSAKQ LAGVRQVLVA
DSGVYANAIA ENLSQLIVSV ASEYQHILAA ASSVGKDVLP RVAALLDVAQ LSEVVEVVSE
DTFVRPIYAG SAMATVQSLD NIKVMTVRAS AFDAVAQDGS ASVQTLDNEY SGDVEFVTQT
LSVSERPDLG AASVVVSGGR AMGSAENFAI LEQLADKLGG ALGASRAAVD AGYVPNDLQV
GQTGKIVAPD LYIAVGISGA IQHLAGMKDS KVIVAINKDP EAPIFQVADY GLEADLFEAV
PKLLELL
|
|---|
| |