| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2581 |
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| Symbol | |
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| ID | 4920887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3043336 |
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| End bp | 3045480 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164175 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_001094706 |
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| Protein GI | 127513509 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.416327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA ATCTTATCGC CTTTGCCGTC GTCGGCGCCT TATCGACCAC ACTGCTCCTC
AGTGGTTGTC AATCAAGCAG CTCAACCACA CAGGCCACCG CCAGCATCGA GGCGCAAAAC
CCACTGATGC AGCCAAGCAC CCTGCAATAT CAAGCCCCAG ATTTTAGCCA GATCAAAGAT
GAGCATTTTA AGAGCGCCCT AGAGCAAGGC ATCAATGAGC ATTATGCCCA GGTGCTGACC
ATTGCCGACA ACAGCGAGTC CGCCACCTTT GCCAACACCA TAGTGGCACT GGAAACCAGC
GGCGAGCTGC TGACCCGCGC CTCCAAGGTG TTCTATAACC TAACAGGGTC AAACAGCAAC
CCGGCGCTGC GTAAGCTTCA AGGCGAGATG GCACCTAAGA TGGCCGCCCA CTCGGACAAC
ATCCACCTCA ACGGCAAGCT ATTTGCCCGC ATCGACAGCC TGTATCAGAG CCGCAACACC
TTAGGGCTGA CCGCCGAAGA GGTGCGCCTC ATCGAGATCT ACCACCAACG CTTCGTCATG
GCCGGTGCCA AGCTGACCGA GGCGCAAAAA GCGCAAATAC GTCTGCTTAA CGAAGAGCAA
TCTAAGCTTA CCAACGAATT TGGTCAGCGT CTGCTGAGAC TCACCAAAGA GATCGCCGTC
GTGGTCGACA GCGTCGATGA ACTCAAGGGA CTGTCAGACA GCGAGATCCG CGCCGCCAAG
GCCGATGCCA AAGCCGCGGG CCATGAAGGC AAGTATCTCA TCAATATCAC CAATACCACC
CGCCAGCCAA TCCTGGCGAA ACTGGAAAAC CGTGAGCTGC GCCAGAAGGT GTGGCAGGCC
TCATCGACTC GCGGCATGAG CGGTGAGAAC GAGACCGCCA CTCTGGTTGC CCGCCTGGCA
CAGCTTCGCG CCGAGCGCGC CCAATTACTG GGTTACAAGA GCTGGGCCGA CTACCGCCTG
ACGCCGCAAA TGGCCAAGAC TCCAGATGCC GTCTACCAGA TGTTCGGCTC TATGGTGCCC
GCCGTGGTGG CCAACACCCA GAAGGAAGCC AATGATATCC AGGCGATGAT CGACAAGACT
GGTGGCGACT TCACTCTGGC GCCATGGGAC TGGGCTTTTT ATGCCGAGAA GGTACGTAAA
GACAAGTTCG ACCTTGACGG CGCCGCCATC AAGCCTTATT TCGAGTTCAA TCGCGTGCTG
CAAGATGGCG TCTTCTTCAC CCTGGAGCGT CTCTATGGTG TGACCCTCAA GCCGCGCCCG
GACCTGCCTG TCTACCACGA AGATGTGAAG GCCTACGAGA TGTTTGACGC CGACGGCAGC
TCGATGGCGA TCTTCTACGC CGACTACTTT GCCCGCGAAG GCAAGCGCGG CGGCGCCTGG
ATGAGCTCCT TCGTGACTCA GTCTAAGCTG CTAAACCAGA AGCCTGTGGT GGTCAACGTG
ATGAACATCA AGAAGGCCCC AGAGGGTGAG CCGACCTTCG TCAGCTACGA TGAAGTCACC
ACCATGTTCC ACGAGATGGG CCATGGCACC CACGGCATGT TCTCTAAGGT GACCTACCCT
AGCCTGTCTG GCACCGCCGT GTCCCGCGAC TTTGTCGAGT TTCCCTCGAC CTTCGAAGAA
GATTGGGCGG CCCACCCCGA GGTGCTGGCC AACTACGCCA AGCACTATGA GACAGGCGAA
GTGATCCCCG ATGAGCTGCT GCAAAAACTG CTGAAATCAC GCAGCTTTAA CCAAGGCTTC
GACACCTTGG AATATATGGC GGCGGCCCTG GTGGATCTCG AGTGGCACTC ACTGAGCGCC
GACACTCCGC TGCAGGATGT GGCCGAGTTC GAAGCCAAGG CACTAGAGAA ACACGGCATC
AATATCGCCG CCGTGCCGCC ACGTTACAAG TCGACCTACT TTGCCCACGC CTTCCCGGGT
GGCTATTCGG CCAGCTACTA CGCCTACATG TGGAGCGAAA TCCTGGCGGC CGACGCCTTC
GCCTATGTGC AGACCCAGGG CGGCCTCAAC CGCGAAATAG GCATGAAGTA TCGCAAGACC
ATCCGCGAGG TGGGTAACAG CGTGCCGCCG ATGGAAGCCT ACAAGGCCTT CCGTGGCCAG
GCACCGACCA CTGATGCCCT GCTTCAGCGC CGCGGCCTCA ACTAA
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| Protein sequence | MKLNLIAFAV VGALSTTLLL SGCQSSSSTT QATASIEAQN PLMQPSTLQY QAPDFSQIKD
EHFKSALEQG INEHYAQVLT IADNSESATF ANTIVALETS GELLTRASKV FYNLTGSNSN
PALRKLQGEM APKMAAHSDN IHLNGKLFAR IDSLYQSRNT LGLTAEEVRL IEIYHQRFVM
AGAKLTEAQK AQIRLLNEEQ SKLTNEFGQR LLRLTKEIAV VVDSVDELKG LSDSEIRAAK
ADAKAAGHEG KYLINITNTT RQPILAKLEN RELRQKVWQA SSTRGMSGEN ETATLVARLA
QLRAERAQLL GYKSWADYRL TPQMAKTPDA VYQMFGSMVP AVVANTQKEA NDIQAMIDKT
GGDFTLAPWD WAFYAEKVRK DKFDLDGAAI KPYFEFNRVL QDGVFFTLER LYGVTLKPRP
DLPVYHEDVK AYEMFDADGS SMAIFYADYF AREGKRGGAW MSSFVTQSKL LNQKPVVVNV
MNIKKAPEGE PTFVSYDEVT TMFHEMGHGT HGMFSKVTYP SLSGTAVSRD FVEFPSTFEE
DWAAHPEVLA NYAKHYETGE VIPDELLQKL LKSRSFNQGF DTLEYMAAAL VDLEWHSLSA
DTPLQDVAEF EAKALEKHGI NIAAVPPRYK STYFAHAFPG GYSASYYAYM WSEILAADAF
AYVQTQGGLN REIGMKYRKT IREVGNSVPP MEAYKAFRGQ APTTDALLQR RGLN
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