| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2576 |
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| Symbol | |
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| ID | 4921064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3035939 |
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| End bp | 3036595 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164170 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001094701 |
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| Protein GI | 127513504 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTAT CGAGAGAACA ACTGGCACAG CGTGTTTCCC AGGAGCTACA GGATGGTTTT
TATGTCAACC TGGGCATTGG CATCCCGACG CTGGTCGCCA ACTATATTCC CGAAGGCATG
CAGGTGATGC TGCAGTCGGA AAATGGCCTG CTCGGCATGG GGGAATTCCC AACCGAAGAG
ACCATAGACG CAGACTTGAT CAACGCGGGT AAGCAGACGG TCACCGCCGT CCCCGGCGCC
TCCTTCTTCT CCTCAGCCGA GAGCTTCGCC ATGATCCGCG GTGGTCATGT GGATCTCACC
GTGCTGGGCG CCTTCGAGGT GGACGTAGAG GGCTCAATCG CCTCCTGGAT GATCCCCGGC
AAGCTGATCA AAGGCATGGG CGGTGCCATG GATCTGGTGG CCGGTGCCGA CAATATCATC
GTCACCATGA TGCACGCCGA TAAGCACGGC AACTCTAAGC TGCTGCCTAA GTGTGAGCTG
CCGCTGACCG GCTATGGCTG CATCAAGCGT GTGCTAACTG ACCTGGCCTT CCTGGAGATC
AAAGATGGCG CCTTCCACCT GCTGGAACGA GCCCCAGGCG TGAGCGTCGA GGAGATCGTC
GAGAAGACCG CCGGCAAGCT TATCGTGCCT GAGCATGTAC CTGAGATGCA GCTCTAA
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| Protein sequence | MALSREQLAQ RVSQELQDGF YVNLGIGIPT LVANYIPEGM QVMLQSENGL LGMGEFPTEE
TIDADLINAG KQTVTAVPGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVE GSIASWMIPG
KLIKGMGGAM DLVAGADNII VTMMHADKHG NSKLLPKCEL PLTGYGCIKR VLTDLAFLEI
KDGAFHLLER APGVSVEEIV EKTAGKLIVP EHVPEMQL
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