| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2538 |
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| Symbol | |
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| ID | 4921153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2996479 |
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| End bp | 2997216 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164132 |
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| Product | AzlC family protein |
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| Protein accession | YP_001094663 |
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| Protein GI | 127513466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA ACGAAAGCCT AGGTAACGAA AGAATAGGCA ATGCATCACC AATGCGTGCG
GCGCTCAAGG GGGCGTTGGC CATCTCGCCC CTAACACTTG CAGTCGTTCC CTGGGGCATA
CTCGCAGGTT CTTTTGCCAT AGACGCCGGG CTCACGCCAT TGCAAAGCCA GGCCATGTCG
GCGCTGGTCT TCGCCGGTGC GGCGCAGCTA GTGGCGCTTG GGATGATCAA GGCGGGGATT
GGCCTTGCCA GCATATTAAT CACCACCTTG CTGATCACCT CGCGCCACCT GCTCTATGGC
ATGGCGATGC GCCCACAGAT CAGCCCACTG CCGCTAAGGT GGCGACTCAC CCTGGGCTTT
CTGCTCACCG ATGAGCTGTT TGCCATCGCC AACCTAGGCA AACAACGCAG CCTTGATCCC
TGGTTCGCCT TCGGCGGCGG CTTTAGCTTC TATCTAGGAT GGAACCTGGC CACGGCAATG
GGGATAACCC TGGGCCATAA GATAGAGAAT CTGGACGCCT TGGGGCTGGA TTTCGCCATC
GCCGCCACCT TCATCGCCAT TGTGGTGCCT GCGGTGAAAC GCCCCTCAAT CCTAGTGTGT
GTGCTGGTCG CCATGGTGGC CAGTGTGGTG TGCGCCCTGA TGGAGCTGCA GGCGGGGCTG
CTTATCGCCT CCTTGACCGG CATGGCTTGC GGCCAGCTCT ACGCAAAACT CAGCGGTGAA
TCTTGGAGGC AGGCATGA
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| Protein sequence | MLDNESLGNE RIGNASPMRA ALKGALAISP LTLAVVPWGI LAGSFAIDAG LTPLQSQAMS
ALVFAGAAQL VALGMIKAGI GLASILITTL LITSRHLLYG MAMRPQISPL PLRWRLTLGF
LLTDELFAIA NLGKQRSLDP WFAFGGGFSF YLGWNLATAM GITLGHKIEN LDALGLDFAI
AATFIAIVVP AVKRPSILVC VLVAMVASVV CALMELQAGL LIASLTGMAC GQLYAKLSGE
SWRQA
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