| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2521 |
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| Symbol | |
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| ID | 4921288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2967363 |
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| End bp | 2969282 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164115 |
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| Product | decaheme cytochrome c MtrF |
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| Protein accession | YP_001094646 |
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| Protein GI | 127513449 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA TGAACAAAAC TTTCCATTAT GCCGCCCTGT TTGGGCTAGT TTCGCTACTC
TCCGCCTGTG GCGGCGATGA TGGTAAACCC GGAAATCCTG GCGAGCCCGG CGGACCACCA
GCCATGGTGA TCGACACCTT AGTGGTCAGC TTCGATCCCG TGCAGATGCA ATCAGGCGTC
GCCACGGTGA ACTACCGTGT CACCAATCAG GATGATGAAC CTGTAGTAGG GATCCCAAGC
GCCACCTTTA TTGCCGCTCA GCTGCTGCCC CAGGGCTATA CCAATGCGGG CAACGCCTCC
CAGTGGCAAT ACTTCACCTC GGAGAGCTGC AACGACAGCT GCCCTGGAGA GTATGTGGAT
CATAAGAATG GCCGTTACAG CTACACCTTT AGCGCAGGTT TCGATGGCTT AAACGATGTC
GGCTATCAGG CCGGCGCCAC CCAGCGCATA GTGGTTAAGC TAGGGGGCGA CAGCCTGGCC
GATGGCACCA GCCTGCCCAT CACCAACCAG CACTTCGACT GGCAGGGTGA CAAAGACGGC
GCCAGCAGCG ATCCGGTATA CACACGTAAC CTAATCAAGA TAGAAACCTG CAACAGCTGT
CACAGCGATC TGGCCTTTCA TCGCGGTAAC TACAACCAGA TTGAGACCTG CGTGACCTGT
CACAACGCCG ATCGCGTCAG CAATCCAGAT AACATCTTCC CGCAGATGAT CCACGGCAAA
CACCTGACCG GCTTCCCCGG CTCGCTGGCA AACTGCCAGA CCTGTCATGC CGAAGATGAG
ACCCTAAGCG AGCAGATGAA CTGGGCACGG GTACCCACCA TGGAGGCCTG TGGCGCCTGT
CATACCTTTA TCGACTTCAA GAAGGGTGAA GGCCATCCGG CGCAGCTCAA CAACGCCAAC
TGCGTCGCCT GTCACAACCC GGATTGGACC GCCAGCGTCC ACAACGACGG CGGCAACGCC
CAGGCATTGG CACAATTTAA GCCTGTGATC ACCAAAGCGA TGCGCAGCGG CGATACCGTC
TCCTTTACCC TAACGCTGGA AAACCCCGCG ACGGGTCAGC CCTACACAGC CAGCGCCGAC
CAACTGGATT TCGTCTCCGA CCTTCGCGTC TACGCCAACT GGGGCACCAG CTTCGACTAT
GCCACCCGCT CGGCGCGCTC CATACGTGTG CATGAGACCG CGCCTATCTC CGGCAGCAAC
GGCAGCTTCG ACTATCAGAT AGCCGGACTA ACGGTCCCCG CTGGTAGCGA GATGGATAAA
GGCACGCTAG CGATTCAGGG CAGAGTCTGC GCCGCCAACG GCGTACTGGG CGCCTGTGGT
GATGAGGCCA ACAGCGAAGT GGTGATCAAA TCCAGCCATC GCTTCTTCGC CGCGGAAGCC
TTGAGCGATA GCGGCCGCCG CGTGGTGGTC AGCAACGACA CCTGCGGTAG CTGCCACGGG
GATCAACAGC TGAACTTCCA CGGTTCGCGA AACGATCTCG AGGGGCAGTG TCAGCTTTGT
CACAACCCCA ACATGCAGGC CGAGGCCGCG GACAATCCGT CCCTCACCAC GGCAGACTTC
AAGCATCTTA TCCACGGCAT TCATAGCGGC CAGCGCGCCG GTTTCGAAGG GATCAACTAC
CCAGGCAACA TAGGTAACTG CGCCCAGTGT CACGCCGACA GAGATGACGT GCTCTCGGTC
GCCCTGCCGC TGGATCCCGG TGTGAAACCG CTGGCCATTG ACGATGGCAG CTACACCAGC
CCAACGGCCG CCATCTGTAG CGACTGCCAC AGCAGCGAGA CCAACAAGAA CCATATGATC
CAGCAAGGCG CAGTGTTCAG CGGCACTCTG TCCGATGCCA CCGCAGGCAC CGAGAGCTGC
AGCACCTGTC ACCGACAAGG CGCCGATGCC GATGTGCTGA GGGTGCATCC CATCAAATAA
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| Protein sequence | MMKMNKTFHY AALFGLVSLL SACGGDDGKP GNPGEPGGPP AMVIDTLVVS FDPVQMQSGV
ATVNYRVTNQ DDEPVVGIPS ATFIAAQLLP QGYTNAGNAS QWQYFTSESC NDSCPGEYVD
HKNGRYSYTF SAGFDGLNDV GYQAGATQRI VVKLGGDSLA DGTSLPITNQ HFDWQGDKDG
ASSDPVYTRN LIKIETCNSC HSDLAFHRGN YNQIETCVTC HNADRVSNPD NIFPQMIHGK
HLTGFPGSLA NCQTCHAEDE TLSEQMNWAR VPTMEACGAC HTFIDFKKGE GHPAQLNNAN
CVACHNPDWT ASVHNDGGNA QALAQFKPVI TKAMRSGDTV SFTLTLENPA TGQPYTASAD
QLDFVSDLRV YANWGTSFDY ATRSARSIRV HETAPISGSN GSFDYQIAGL TVPAGSEMDK
GTLAIQGRVC AANGVLGACG DEANSEVVIK SSHRFFAAEA LSDSGRRVVV SNDTCGSCHG
DQQLNFHGSR NDLEGQCQLC HNPNMQAEAA DNPSLTTADF KHLIHGIHSG QRAGFEGINY
PGNIGNCAQC HADRDDVLSV ALPLDPGVKP LAIDDGSYTS PTAAICSDCH SSETNKNHMI
QQGAVFSGTL SDATAGTESC STCHRQGADA DVLRVHPIK
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