Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2516 |
Symbol | |
ID | 4921283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2959443 |
End bp | 2961113 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640164110 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_001094641 |
Protein GI | 127513444 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0318208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCATG TGGACACCGA AGTACGTCCA AGTAACTTCA TTCGTAACAT CATAGATGAA GATTTAGAGA GCGGTAAGCA CACCCGTGTG CACACTCGTT TTCCGCCCGA GCCAAACGGC TATCTTCATA TCGGTCACGC AAAATCGATC TGTTTGAACT TCGGTTTGGC GCAGGACTAC AAGGGGCTAT GTAACTTACG TTTTGATGAT ACCAACCCTG AGAAAGAGGA TATCGATTAC GTTAACTCTA TTCAGGCCGA CGTACATTGG TTAGGTTTCC AATGGGATGG TGAGATCCGT TATTCGTCGA ACTATTTCGA TCAGCTGCAC CAATACGCGG TAGAACTTAT CAACAAGGGA CTGGCTTATG TCTGTTTCCT CAATGGTGAG CAGACCCGTG AATACCGTGG CACCCTGAAA GAGCCGGGTA AGAACAGTCC ATATCGCGAT ACCTTTGTCG AAGAAAACCT TGAGCTGTTC GAGAAGATGC GCAAGGGCGA ATTCAAAGAG GGCGAATGTG CACTCAGGGC CAAGATCGAT ATGGCGTCAC CTTTCATGTG TATGCGCGAC CCTGTGATCT ATCGTATCCG TTTCGCCCAT CACCATCAGA CTGGCGACAA GTGGTGCATC TACCCTATGT ATGATTTCAC CCACTGTATT TCCGATGCGC TGGAAGATAT CACTCATTCG CTCTGTACTC TGGAGTTCCA GGATAACCGC CGTCTGTATG ACTGGGTGCT GGATAACCTG GACGATTTCC AGGCGCCAAA CCGTACCCGT CAATATGAGT TCTCTCGCCT GAATCTGGAA TACACCCTGA TGTCTAAGCG TAAGCTTAAC GATCTTGTGG TGCGCGGTCT GGTATCAGGA TGGGACGACC CACGTATGCC AACCATCGCC GGCTTGCGTC GTCGTGGCTA CACGCCTGCG GCGATTCGCG AGTTCTGCCG TCGTATCGGT GTGACCAAGC AAGAGAACAT GGTCGAAGTC AGCATGCTTG ACGCCTGTAT CCGTGAAGAG CTGAACGAGC ACGCGCCTCG CGCCATGGCG GTGATCAACC CGGTTAAGGT GATCATCGAA AACTACCCGG AAGGCCAGGT AGAGAAGCTA TCTGCACCGG CGCACCCGAC TATCGAGTCT ATGGGCGAGC GCGAGCTGGT CTTCGGTCGC GAACTCTATA TTGATGCCGA TGATTTCCGT GAAGAGGCCA ACAAGAAGTA CAAGCGTCTC ATTCAGGGCA AAGAGGTGCG TCTGCGTAAC GCCTATGTGA TCAAGGCCGA GCGCTGCGAT AAAGATGAGG CGGGCAATGT GACCACCATC TATTGTACCT ATGACGATCA GACCCTGGGT AAGAACCCAG CCGATGGTCG TAAGGTGAAA GGGGTGATCC ATTGGGTTGA GGCCACAAGC GCCGTGCCTG CCGAGTTCCG TCTATATGAC AGACTCTTCA ATCAGCCAAA CCCGGCGGCC GCCGAGACGG TCGATGAGGT GTTAAACCCT AAGTCATTGG TGGTTAAGCA TGGCTTGGTC GAGCCTGGCC TGGTTAATGC GGAGGCCGAG AAGGCCTATC AGTTCGAGCG CGAAGGTTAC TTCTGCGCCG ATAGCAAAGA TTCATCGCCT GAGCATCTGG TGTTTAACCT GACGGTTGCC CTGCGAGACT CTTCTAACTA A
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Protein sequence | MSHVDTEVRP SNFIRNIIDE DLESGKHTRV HTRFPPEPNG YLHIGHAKSI CLNFGLAQDY KGLCNLRFDD TNPEKEDIDY VNSIQADVHW LGFQWDGEIR YSSNYFDQLH QYAVELINKG LAYVCFLNGE QTREYRGTLK EPGKNSPYRD TFVEENLELF EKMRKGEFKE GECALRAKID MASPFMCMRD PVIYRIRFAH HHQTGDKWCI YPMYDFTHCI SDALEDITHS LCTLEFQDNR RLYDWVLDNL DDFQAPNRTR QYEFSRLNLE YTLMSKRKLN DLVVRGLVSG WDDPRMPTIA GLRRRGYTPA AIREFCRRIG VTKQENMVEV SMLDACIREE LNEHAPRAMA VINPVKVIIE NYPEGQVEKL SAPAHPTIES MGERELVFGR ELYIDADDFR EEANKKYKRL IQGKEVRLRN AYVIKAERCD KDEAGNVTTI YCTYDDQTLG KNPADGRKVK GVIHWVEATS AVPAEFRLYD RLFNQPNPAA AETVDEVLNP KSLVVKHGLV EPGLVNAEAE KAYQFEREGY FCADSKDSSP EHLVFNLTVA LRDSSN
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