| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2490 |
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| Symbol | |
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| ID | 4921385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2929103 |
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| End bp | 2930494 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164081 |
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| Product | anion transporter |
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| Protein accession | YP_001094615 |
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| Protein GI | 127513418 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | [TIGR00785] anion transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0173335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG ACACCACACA AGAGGCGATC GCCGCACCGC CAAAGCAGGC AGCCCAAACC
AACTTGCCGA TTCTATTTGG CGATATAGTG CTGTTTGCCT TGCTCTATAA CTTTCTGCCT
TTCGAGCCAG GGGTGAATAC CGGCATCGCT ATTCTCGTCT TCGCCGCCGT ACTCTGGCTG
ACCGAAGCAA TTCACATCAG CGTCACCGCC ATACTGATCC CTATCATGGG CGTCTTGCTG
GGAGTTTTTG AAACCAAGGC GGCCATGAGC AACTTCGCCA ATCCTATCAT CTATCTCTTC
TTCGGTGGCT TCGTGCTGGC CGCGGCCCTC AACCATCAGG GCATTGATAG ACGTATCGCC
CAAAAGGTAT TGACCGCCTC CAAGGGCAAA CTCAGTATCG CCTGCATGCT GCTGTTTGGG
ATCACAGCGC TACTCTCCAT GTGGATCAGC AACACGGCCA CGGCGGCCAT GATGCTGCCT
CTGGCCCTTG GGATCCTCAG GCAACTGGAT TTCAAGGAGC ACAGAAGCAC CTATCTCTTC
ATGCTGCTGG GCATCGCCTA CTCCGCCAAC ATTGGCGGCA TAGGCACCCT GGTGGGCAGC
CCGCCGAACG CGATTGCCGC AGCCCAGGTC GGCCTGAGTT TCGCCGACTG GCTAGAGTTT
GGCCTGCTTA CCGTGGCCCT CATGCTGCCT AGCATGTTGA TTGCGCTCTA TATCTACCTA
AAACCCAACC TCAATGTGGT GTGTGAGATC CCTAAGAGCA ACGAACAACT CGCCCTGCAG
GGTAAGCTCA CCTTGCTTAT CTTCCTTACC ACTGTGTGCT GCTGGATCTT CAGCAAGCCT
ATCTCCAACG CACTGGGGGG AATTAAACAG TTCGACACCA TAGTGGCACT GGGTTCAGTC
GTCATGCTAG CCGGGCTTGG TCTGGTCGAC TGGAAGAAGA TTGAGAAAAC CACTGACTGG
GGCGTGCTGA TCCTCTTCGG TGGCGGCCTC ACGCTCAGCG CCATCCTCAA AACCACGGGC
ACCAGCGTCT TCCTGGCCCA TTGGGTCACC GATATCTTCG GCAATACCCA TATGGCGCTG
TTTACCTTTG CGGTGATCTT CTTCGTGGTG ATGCTTACCG AATTTGCCAG TAACACCGCC
AGCGCCGCCC TCCTGGTGCC TGTGTTTGCC GCCATCGCCG AGGCGTTAGG CCTGTCACCC
GTGATGCTCT CTGTGCTCAT AGGTATCGCA GCGTCCTGCG CCTTTATGTT ACCGGTTGCC
ACACCGCCAA ACGCCATCGT TTACGGCTCT GGCTTTATCA AGCAATCTGA GATGATGCGC
GCCGGGGTGA TCATCAACTT CATCAGTATG TTGGCGCTCT ATGTAATCGC CCATCTGTTC
TGGACCATCT AA
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| Protein sequence | MSLDTTQEAI AAPPKQAAQT NLPILFGDIV LFALLYNFLP FEPGVNTGIA ILVFAAVLWL
TEAIHISVTA ILIPIMGVLL GVFETKAAMS NFANPIIYLF FGGFVLAAAL NHQGIDRRIA
QKVLTASKGK LSIACMLLFG ITALLSMWIS NTATAAMMLP LALGILRQLD FKEHRSTYLF
MLLGIAYSAN IGGIGTLVGS PPNAIAAAQV GLSFADWLEF GLLTVALMLP SMLIALYIYL
KPNLNVVCEI PKSNEQLALQ GKLTLLIFLT TVCCWIFSKP ISNALGGIKQ FDTIVALGSV
VMLAGLGLVD WKKIEKTTDW GVLILFGGGL TLSAILKTTG TSVFLAHWVT DIFGNTHMAL
FTFAVIFFVV MLTEFASNTA SAALLVPVFA AIAEALGLSP VMLSVLIGIA ASCAFMLPVA
TPPNAIVYGS GFIKQSEMMR AGVIINFISM LALYVIAHLF WTI
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