| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2405 |
|---|
| Symbol | |
|---|
| ID | 4921795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 2822361 |
|---|
| End bp | 2823596 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640163995 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001094530 |
|---|
| Protein GI | 127513333 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.774074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.803755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACCA GCCCAGTAAA AGGTTTGCTG CCGCTTTCGA GCCCAGTTTT ATTAGCTCTC
TTGCTGCTAT GCCTCACGGC CTGCGGCGGC AGCGATGACT CCTCGATCAA TCCAACAGGC
ACAGACACCA ACCAGCCTGG CACACCTGTG ACCCCGCCGA CGGGCGGCAC AGATCCCTCT
ACGGATATCT GCGATAGCCA GGAGGGGGAG ATCAACTGGC AGGCACTGAT GGAGCAAGAT
TGTCAGCTTC TGTCCCAATA TCGGCTATTT CAGCAGCCTG ATAAACCAAC CACAGCTCCT
AATGGCCCAG GTTTTAGCTA CGAACTCTCG AGCCAACTGT TTACCGACTA CGCCCATAAA
TACCGTTTCA TCTTCCTGCC CGATGGCAGC CAGATCGACT ATCATCCGAG CGACACCTTC
GACCTGCCGG TAGGCGCCGT GCTGGTCAAA ACCTTTGCCC TGCCAAGCGA CACCCAGCTC
ACAGGGGAAG CCAACGAGAC CCTGGTCGAG ACCCGTCTGC TTATCCACCG CGAGAGCGGC
TGGACGGCAC TACCCTATCT CTGGCAAGGC GGCGAGGCGC GCCTCGCCGT TGCCGGCGCC
AATCAGGCCC ACAGCCTGAC GCGTCAGGGC GAGCAGCTGG AGTTCACCTA CCATGTGCCC
AGCCGGGCAG AATGTAAGGT GTGCCATCAA CGCGCTGGTG ACGGAGGCGC CAAGATCTAT
CCCATAGGCC TCAAACCCTA CCTGCTTAAC CATGAGGTGT TAGTCGAGAA TCAGACGGTG
AATCAGCTCG AACATTGGCG CGACAAGGGA CGCTTGAACG GCCTGCCACA GCACGGCGCC
CCAGATTCGG CGCCGGCGAT CACAGATGAG AGTGGCGATC TGACCACCAG GGCTAAGGGA
TATTTGGATA TCAACTGCGC CCACTGTCAC AGGGCCGAAG GCTTTGCCAG CATCTCGGGG
CTGCGCCTGG GTTTCTATGT GGAGCACACC AGCTATCAAT ATGGGATCTG TAAGCAGCCA
CCGGGCTGGG ACGGCGGCGA AAAGGGTCTC TCCTACGACA TCATTCCCGG CGATGGCGAG
CACTCCATCT TGCTCTATCG CCAGATGCTA GATGCCCCCA AAGATCGCAT GCCGCCTATT
GGCCGAAGCC TTAGCCATGT GGAGGCATTG ACAATCCTAC AAAGCTGGAT AGATAGCCTG
TCGCCAAGTT TAGGCAACTG CCAGCATGGG GGCTAG
|
|---|
| Protein sequence | MLTSPVKGLL PLSSPVLLAL LLLCLTACGG SDDSSINPTG TDTNQPGTPV TPPTGGTDPS
TDICDSQEGE INWQALMEQD CQLLSQYRLF QQPDKPTTAP NGPGFSYELS SQLFTDYAHK
YRFIFLPDGS QIDYHPSDTF DLPVGAVLVK TFALPSDTQL TGEANETLVE TRLLIHRESG
WTALPYLWQG GEARLAVAGA NQAHSLTRQG EQLEFTYHVP SRAECKVCHQ RAGDGGAKIY
PIGLKPYLLN HEVLVENQTV NQLEHWRDKG RLNGLPQHGA PDSAPAITDE SGDLTTRAKG
YLDINCAHCH RAEGFASISG LRLGFYVEHT SYQYGICKQP PGWDGGEKGL SYDIIPGDGE
HSILLYRQML DAPKDRMPPI GRSLSHVEAL TILQSWIDSL SPSLGNCQHG G
|
|---|
| |