| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2400 |
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| Symbol | |
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| ID | 4921790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2814205 |
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| End bp | 2815134 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163990 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094525 |
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| Protein GI | 127513328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
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| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0470445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.720429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATTT TGATCACCGG CGGAACCGGA TTCATAGGCA AGGCCTTGGT GAAGGCCTTG
GAAGGCGAAC ATCAACTCAC CTTGCTCACC CGCTCGGCCG GCAAGGCCCA CCTCACCCTT
GGCAACCAAC ATAAGTTACT GGGTAACCTC AGCGCCCTGG CCAATCTCGA CGGCTTCGAT
GCCGTCATCA ACCTGGCGGG CGAACCCATT GCCGATAAGC GCTGGAGCCT GGAGGTAAAG
CAGAAGATCT GTGACAGTCG CTGGGATACC ACAGCGCGTC TGGCCAAACT CTTCGAGGCC
AGCAAGACGC CGCCTAAGGT CTTCATCAGC GGCTCTGCCA TCGGCATCTA TGGCGATCAT
GACAAGCAGG TGCACCTGGA TGAGAGTTTC GACCTCGCCC ACTTCAAAGA CACAGGCAAG
GAGGAGAAAT TCCCCCATAG CGTCTGCGCC AAATGGGAAG AGTTAGCCCT GCAGTGCCAA
GGGCTGACCC GAGTCTGTGT GATGCGTATC GGCCTGGTGC TCGGTTTAAA CGGCGGCGCG
CTGAAGAAGA TGTTGCTGCC CTTCAAGCTG GGCGCTGGCG GCGTGGTGGG CTCGGGCAAA
CAGGGGATGA GCTGGATCCA CAGAGAAGAT CTTATCGCTA TCATACTGTT TCTGTTAAAT
AACGAGCAGT GCCAGGGGAT CTATAACGCC ACCGCCCCTA ACCCGGTCAG CAATCGCGAA
TTTACCAACT CTTTGGGCAC CGCCCTGAGC CGCCCCACCC TGCTGCCTAT GCCTGCCCCT
ATCCTAAGCC TGGCCTTAGG TGAGATGTCT CAGCTCTTGC TTGAAGGCCA ATATGTCTAC
CCCGATCGGC TAACCCAGGC GGGCTTTAGT TTTCACTACA CTCATCTGGA TGACGCGCTG
ACAAATCTAT TTGGCGCCTC CAAAAGCTAA
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| Protein sequence | MRILITGGTG FIGKALVKAL EGEHQLTLLT RSAGKAHLTL GNQHKLLGNL SALANLDGFD
AVINLAGEPI ADKRWSLEVK QKICDSRWDT TARLAKLFEA SKTPPKVFIS GSAIGIYGDH
DKQVHLDESF DLAHFKDTGK EEKFPHSVCA KWEELALQCQ GLTRVCVMRI GLVLGLNGGA
LKKMLLPFKL GAGGVVGSGK QGMSWIHRED LIAIILFLLN NEQCQGIYNA TAPNPVSNRE
FTNSLGTALS RPTLLPMPAP ILSLALGEMS QLLLEGQYVY PDRLTQAGFS FHYTHLDDAL
TNLFGASKS
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