| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2341 |
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| Symbol | |
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| ID | 4922068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2734555 |
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| End bp | 2735907 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163926 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001094466 |
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| Protein GI | 127513269 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAGC CTAAGTTGCA TATTTTGGTG GTAGAGGATG AGCCGGATCA GAGAGCATTG
ATCGTACAGA TGTTGACGGC CAACCAGTAT TTGGTGGAGA GTGCCGACAG TGTCGAGCAG
GCGATCGTGA TGATTAAGGC ATCGGCGCCG GATCTGGTGT TTTCCGACTG GAAGCTGGGG
CAGTTAACCG GCATGGATCT GCTTAACTAT GTGCGCCGCG AACACCCGGA TATGGGCTTT
ATCATCGCCA CCGCCTACGG CACCATCACC CACGCGGTGG ATGCCATGCA AGCGGGGGCG
GACGACTATC TGGCCAAGCC CTATCAGCGC CAGAGTCTAT TGTTGGCCAT CGAAAAGGTG
GCCAAGTCTA TTGCGCTGAA GCGGCAGAAC CGCCGCCTCT CTTCCGAGCT GTCTCAGCAG
CAGGAGCTGG TGGGGCTGGT GGGGCGCTCT GCCCTGATGC AGAAGGTGTA TCAGAGGGTG
CAGCGGGTGA GCGCCACAGA TGCAACCGTG CTGATTGGCG GCGAGAGTGG CACGGGCAAG
GAGCTGGCGG CGCGGGCGCT GTATCAGTTG TCGGCGCGTA GCCATAAGCC CTTCGTCGCC
ATCAACTGCG GCGCGATCCC CGAGTCCTTG GCCGAGGCTG AGCTGTTCGG CGCCGAGAAG
GGGGCTTATA CGGGGGCCAA TACCCAGAAG ATAGGTAAGC TAGAGGCCGC CGATGGCGGC
ACCGTCTTTC TCGACGAGAT AGGCGAGCTG CCCCTGCTGC AACAGACCAA ACTGCTGCGT
TTCTTGCAGG AGGGGGTGAT ATCCCGTCTC GGGCAGAACA GCGAGATCAA GCTGGATGTC
AGGGTGATCG CCGCGACCCA TAGGGATCTG CAGCAGGAGG TGGCCGAGGG GCGCTTTCGC
GAGGATCTCT ATTACCGCCT CAACGTGGTG CCTATCCATA TGCCGGCACT TAGGGAGCGA
CCGGAGGATA TCGGCCGACT GGTGGAGCAC TTTCTTAAAC TCCACGCCAA TCAATATGGC
ATGGAGGTGC CCAAGCTAAG CCGGGATACC TTAAAGTCGC TGCTGGACCA TAGCTGGCCG
GGTAATGTGC GTGAGCTGGC GAATCGCATC GAACGTTTCG TGTTACTCGG CGATGAAGAG
GAGATGGTGC AGGAACTCGG CGCCGCGCCG CAGCCGCTGG ATACCAAGCG TTTTGTCTTG
CCCGAGGCGG GTATCGAGTG GGAGAGTTTC GAGAAGGATT GCCTGCGCCA GGCCCTGGAC
CGTTTCGAGG GCAATCGCAC CAAGGCGGCT AAGTGTTTAG GCTTGAGTTA TAAGGCCTTT
CTCTATCGCC TGGAGAAATA TCAGCTGGTC TAG
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| Protein sequence | MEQPKLHILV VEDEPDQRAL IVQMLTANQY LVESADSVEQ AIVMIKASAP DLVFSDWKLG
QLTGMDLLNY VRREHPDMGF IIATAYGTIT HAVDAMQAGA DDYLAKPYQR QSLLLAIEKV
AKSIALKRQN RRLSSELSQQ QELVGLVGRS ALMQKVYQRV QRVSATDATV LIGGESGTGK
ELAARALYQL SARSHKPFVA INCGAIPESL AEAELFGAEK GAYTGANTQK IGKLEAADGG
TVFLDEIGEL PLLQQTKLLR FLQEGVISRL GQNSEIKLDV RVIAATHRDL QQEVAEGRFR
EDLYYRLNVV PIHMPALRER PEDIGRLVEH FLKLHANQYG MEVPKLSRDT LKSLLDHSWP
GNVRELANRI ERFVLLGDEE EMVQELGAAP QPLDTKRFVL PEAGIEWESF EKDCLRQALD
RFEGNRTKAA KCLGLSYKAF LYRLEKYQLV
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