| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2275 |
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| Symbol | |
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| ID | 4922630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2658261 |
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| End bp | 2659058 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640163860 |
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| Product | extradiol ring-cleavage dioxygenase III subunit B |
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| Protein accession | YP_001094400 |
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| Protein GI | 127513203 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.994054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC TGTTCGTCTC CCACGGCTCG CCCATGTTGG CCCTGGATGA CAGCGACAAC
GCCGCGTTTC TCGCCGAGCT GGGTCAGGTG CTGCCAAGAC CCAAGGCGAT ATTGGTGTTC
TCGGCCCACA CAGATATGGG CGGCAAGGTG CGTATCGCAT CTAGCGAGGC CCCGCGCACA
GTGCACGACT TCTACGGCTT TCCCGACGCC CTCTACCAAG TTAACTATCC GGCCCCTGGC
GCGCCTAAGC TGGCCACCGA GGTCGCGGAT CTTCTGCAAA CCGCCGGGTT TGACGCCGAG
TTAGATGAGC AGCTTGGCTG GGATCACGGC CTCTGGACGC CGCTGTGCCG TCTCTATCCC
GCGGCGGATA TCCCTCTGGT GCTGGTCTCT ATCGATAGCC GCCAGGGCGC CAGCTATCAC
TACCGTCTGG GCCAGGCGAT AAAATCCCTG CGCACTGACG GCGTATTGGT ACTGGGCTCG
GGTGGCATCA GCCACAACCT GGGCGAGCTG TTTCGCCGCC CCGGCGACCC GCAAAAGGTA
GAGAAGATGC AGAGCTTCGT CAATTGGATC GCCGATAAGC TGACCCAAGG GGATCTGCCC
GCACTGCTGG ATGTCGAGCG CCAGGCCCCA CACGCCAGAT TCAACCACCC CAGCATAGAA
CACCTGATGC CCTTCTACGT CGCCCTAGGC GCAGGACAGG GCGAAGGGGT TAATGAGGCC
ACCAAGCCCC CACTACGACT ACACCAAAGC ATCGAACTAC AAATCCTCGC CCTCTACACC
TACGCCTGGC TCGAGTGA
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| Protein sequence | MPSLFVSHGS PMLALDDSDN AAFLAELGQV LPRPKAILVF SAHTDMGGKV RIASSEAPRT
VHDFYGFPDA LYQVNYPAPG APKLATEVAD LLQTAGFDAE LDEQLGWDHG LWTPLCRLYP
AADIPLVLVS IDSRQGASYH YRLGQAIKSL RTDGVLVLGS GGISHNLGEL FRRPGDPQKV
EKMQSFVNWI ADKLTQGDLP ALLDVERQAP HARFNHPSIE HLMPFYVALG AGQGEGVNEA
TKPPLRLHQS IELQILALYT YAWLE
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