| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2214 |
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| Symbol | ihfA |
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| ID | 4923035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2583293 |
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| End bp | 2583589 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640163799 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_001094339 |
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| Protein GI | 127513142 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.600475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.239128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTTA CCAAAGCCGA AATGGCAGAA CATCTTTTTG AAACGCTTGG TATTAACAAG
CGAGTTGCGA AAGAGATGGT TGAGGCATTT TTCGAAGAAA TTCGTCAAGC CCTCGAGAAC
GGTGAGCAGG TCAAGTTATC TGGCTTTGGC AACTTTGACC TAAGGGACAA AAATCAAAGA
CCGGGTCGCA ACCCTAAAAC AGGCGAGGAT ATCCCGATTT CTGCTCGCCG CGTGGTGACT
TTCCGTCCAG GACAGAAACT TAAGAGTCGT GTTGAAGAGG CTAACGCCGG TAAATAA
|
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| Protein sequence | MALTKAEMAE HLFETLGINK RVAKEMVEAF FEEIRQALEN GEQVKLSGFG NFDLRDKNQR
PGRNPKTGED IPISARRVVT FRPGQKLKSR VEEANAGK
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