| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2208 |
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| Symbol | |
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| ID | 4923029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2570346 |
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| End bp | 2572163 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163793 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_001094333 |
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| Protein GI | 127513136 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00762588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.156391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA GTAAACTAGC AGGCATGATC TCCCTAATCA CACTGGGCAT CGCCGCCTCG
AGTCAGGCAG CAGACAACCG CTATGTGGTT CAAGTCGATA ATCAACACAA GGGCATAGTG
AAGGCCCTGG CAGTCAAGTC GGGCGCGACA ATCGAACTCG ACGGTGATGG CTTCTTCGCC
GCCAGCTTTA ACGCCCAGGA TCTCGCCCAG GTCAAAGGCC TGTTAAACAA TCCCCATGTG
AAGCTGGTCG AGGAAGACCA ACGCCGTACC CTGCAGTCAC TCTATCAGGA TGATGCAGGC
GACCCTATGT TGAGCCAACT CACCCCCTAT GCCATCTATC AGTCTCAGGC AGATCAAGTT
GATTTCGTGC CGGGCGCCGG CATTAAGGTG TGCGTGATCG ACTCGGGCCT GGATAGAAGC
AACCCTGACT TTAACTGGGG AGCCATCACA GGCGATAACG ATTCAGGCAC AGGCGATTGG
GATGTCAACG GCGGACCTCA CGGCACCCAC GTTGCCGGTA CCATAGGCGC GGCAGACAAC
GGCATAGGTG TCGTTGGTAT GGCACCTGGG GTCGATATGC ATATCATCAA GGTCTTTACC
GCTAGCGGCT GGGCCTACTC TTCTGATCTG GCTCATGCCA CCGACCTCTG TAGCCAGGCG
GGCGCCAACA TCATCAGCAT GAGTCTAGGT GGTGGCGGTG CGAGCAGCAT TGAATCTAAC
GCCTTCGAAG CCTTTACCCA GGCAGGTGGC CTGGTGGTCG CCGCTGCGGG CAACGATGGT
AACAACGCCC GCTCCTACCC AGCCGCCTAC CCCGCCGTCA TGATGGTTGG CGCCAACGAT
GCCGATAACA ATATCGCCAG TTTCTCACAA TTTCCTAGCT GTAGCAGTGG CCGAGGCAAA
CATGCAACCC AAGATGAAAT GACCTGCGTA GAAGTCACCG CCGGCGGCGT ACAAACGCTG
TCTACCTATC CTGCCGAGAT GGCCACCATA GCCGCTATGT CGGCGGATGA TGTTTTCTTC
GAGGCCTCGG CCATGGAAAA TATCGGCAGC GCCAGTGGCA GCACCTATTT CATGGGCACG
GCCGAAACCT TAGACACCCG AGCCCAGGGA AGTGTCTGCG TTATCGATCG CGGCAACATC
TCCTTCCATG ACAAGGTCGC CAACTGTGAG GCCTCTGGCG GTATCGGCGC CATCATCGTC
AATAACGTCG ACGGCATGCT ATATGGCACG CTGGGTGACG CCAACAGCAC TCAGATTCCC
GCCGTGGGTG CGGCGCTCAG TGACCGCACA GCCCTGATTT CAGCGACTCA AGCCTCGGTG
TCTATCGCGA GTGGCGATTA CGGTTATATG AGCGGCACCT CGATGGCGAC CCCTGCCGTG
TCGGGCGTAG CGGCACTGGT GTGGTCAAAC TTCCCAGAGT GTACTGGTAG CGAGATCCGT
CAAGCACTTA AGGCGACCGC CGAAGATCAG GGCATACCTG GACACGATGA GTATTTTGGC
TATGGCATAG TCAAGGCCAA GGCGGCTTAT GACTATCTGC AAAGCAGTGG TTGTAATGGT
CAAGGCGGCA CGCCGGGAAC CTTTAGCCTA AACGCCGAGT ATGAATACGC GCGAGGCAAA
CACAGGGTTA ACCTGACGAC GGTCGCGGCA TCGAGCCCTA AGGTAGATAT CTACCGTAAC
GAGCAGCTCA TCGCCACGGT AGCGGCAAAC ACCCTCTATA CCGATAGCTT TGGTCGCAAG
GCGACTGGCA ACTTCAACTA CAAGGCCTGT GAGGAAAATA CCCAGATCTG TACCGAGACC
CAAAGCGTCA ACTTCTAG
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| Protein sequence | MKISKLAGMI SLITLGIAAS SQAADNRYVV QVDNQHKGIV KALAVKSGAT IELDGDGFFA
ASFNAQDLAQ VKGLLNNPHV KLVEEDQRRT LQSLYQDDAG DPMLSQLTPY AIYQSQADQV
DFVPGAGIKV CVIDSGLDRS NPDFNWGAIT GDNDSGTGDW DVNGGPHGTH VAGTIGAADN
GIGVVGMAPG VDMHIIKVFT ASGWAYSSDL AHATDLCSQA GANIISMSLG GGGASSIESN
AFEAFTQAGG LVVAAAGNDG NNARSYPAAY PAVMMVGAND ADNNIASFSQ FPSCSSGRGK
HATQDEMTCV EVTAGGVQTL STYPAEMATI AAMSADDVFF EASAMENIGS ASGSTYFMGT
AETLDTRAQG SVCVIDRGNI SFHDKVANCE ASGGIGAIIV NNVDGMLYGT LGDANSTQIP
AVGAALSDRT ALISATQASV SIASGDYGYM SGTSMATPAV SGVAALVWSN FPECTGSEIR
QALKATAEDQ GIPGHDEYFG YGIVKAKAAY DYLQSSGCNG QGGTPGTFSL NAEYEYARGK
HRVNLTTVAA SSPKVDIYRN EQLIATVAAN TLYTDSFGRK ATGNFNYKAC EENTQICTET
QSVNF
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