| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2200 |
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| Symbol | |
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| ID | 4923114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2560961 |
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| End bp | 2562031 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163785 |
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| Product | imidazole glycerol-phosphate dehydratase/histidinol phosphatase |
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| Protein accession | YP_001094325 |
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| Protein GI | 127513128 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase
[COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR01261] histidinol-phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0671818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC AGAAAATCCT CTTTATCGAC CGCGATGGCA CACTGATCGA GGAGCCAGTC
ACCGACAAGC AGGTCGATAG CCTGGCCAAG CTGGTATTTG AGCCTCAGGT GATCCCCGCA
CTGCTCAAGC TACAGGGCGC CGGCTACCGC CTGGTGATGG TGAGCAATCA GGACGGCCTT
GGCACCCCCT CCTTCCCCAA GGATGACTTC GATGCGCCCC AGAATATGAT GATGCAGATC
TTCAACAGCC AGGGGGTCAA GTTCGATGAT GTGCTCATCT GCCCACACTT TGACGATGAA
AACTGTAGCT GCCGCAAACC TAAGCTGGGT CTGGTCAAGG CTTACCTCAC CGAGGGCCGG
GTCGACTTTA CTCAGTCGGC GGTGATCGGC GACAGAGAAA CCGATCTGGG CCTGGCCGAG
GCGATGGGCA TCACAGGCAT ACAGTACAAT CGCGACACCT TGAACTGGGA CGCCATTGCC
GAACAACTGC TTGGGGGCAA CCGCGTGGCG ACTGTGGTGC GTACCACCAA GGAGACCGAC
ATCAAGGTCA CTGTCGATCT CGACAGTCAG CTAAAGAGCA GCATCAATAC CGGCATCGGC
TTCTTCGACC ACATGCTGGA TCAAATCGCC ACCCACGGTA ACTTCAGGCT AGATGTGAGC
GTCGATGGCG ATCTGGAAAT CGACGATCAC CACAGCGTCG AAGACACGGC CCTGGCCATT
GGTGATGCCC TCAGGCAGGC CCTTGGGGAT AAACGCGGCA TCGCCCGCTT CGGCTTTAGC
ATCCCCATGG ATGAAGCCAG CGCCAGCTGC CTGCTGGATC TCTCCGGTCG CCCCTTCATC
AAGTTTGAGG GGCAGTTCGA GCGCGAGATG GTCGGCGAGA TGGCCACTGA GATGGTGCCT
CACTTCTTCC GCTCCCTCGC CGATGGCCTG CGCTGCACCC TGCACCTCTC GACCCAAGGC
GATAACGATC ACCACAAGGT GGAGAGCCTG TTTAAGGTCT TTGGCCGTAC CCTGCGCCAG
GCGGTGAAGG TCGAGGGCGA CGCCCTGCCA TCGAGCAAGG GGGTGCTATG A
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| Protein sequence | MMKQKILFID RDGTLIEEPV TDKQVDSLAK LVFEPQVIPA LLKLQGAGYR LVMVSNQDGL
GTPSFPKDDF DAPQNMMMQI FNSQGVKFDD VLICPHFDDE NCSCRKPKLG LVKAYLTEGR
VDFTQSAVIG DRETDLGLAE AMGITGIQYN RDTLNWDAIA EQLLGGNRVA TVVRTTKETD
IKVTVDLDSQ LKSSINTGIG FFDHMLDQIA THGNFRLDVS VDGDLEIDDH HSVEDTALAI
GDALRQALGD KRGIARFGFS IPMDEASASC LLDLSGRPFI KFEGQFEREM VGEMATEMVP
HFFRSLADGL RCTLHLSTQG DNDHHKVESL FKVFGRTLRQ AVKVEGDALP SSKGVL
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