Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2183 |
Symbol | |
ID | 4923282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2543261 |
End bp | 2543542 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640163768 |
Product | hypothetical protein |
Protein accession | YP_001094308 |
Protein GI | 127513111 |
COG category | [S] Function unknown |
COG ID | [COG3100] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000467377 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000159603 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATCTGTG CTGTATATAA GAGTCGCTTA AAACCCGATA GCTATCTTTT TGTGGAGAAA CGCAACGATT TCGAGCGTGT ACCCGAGCCT CTGATGAAGA TGTTTGGCAC GCCAGAACTG GTGATGTTGC TGCCGCTAAA CAAACGTGAA CAGTTAGCCC TTGCCGATAT CGAAAAAGTA AAAGTTGAAC TAGCCGAGAA GGGGTATTAT CTTCAATTAC CACCACCGCC GGTTAACCTA CTCGAAGAGT ACAAGAAAGA GATAGGTTAT AGCAGAGATT AG
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Protein sequence | MICAVYKSRL KPDSYLFVEK RNDFERVPEP LMKMFGTPEL VMLLPLNKRE QLALADIEKV KVELAEKGYY LQLPPPPVNL LEEYKKEIGY SRD
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