Gene Shew_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2183 
Symbol 
ID4923282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2543261 
End bp2543542 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content44% 
IMG OID640163768 
Producthypothetical protein 
Protein accessionYP_001094308 
Protein GI127513111 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000467377 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000159603 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATCTGTG CTGTATATAA GAGTCGCTTA AAACCCGATA GCTATCTTTT TGTGGAGAAA 
CGCAACGATT TCGAGCGTGT ACCCGAGCCT CTGATGAAGA TGTTTGGCAC GCCAGAACTG
GTGATGTTGC TGCCGCTAAA CAAACGTGAA CAGTTAGCCC TTGCCGATAT CGAAAAAGTA
AAAGTTGAAC TAGCCGAGAA GGGGTATTAT CTTCAATTAC CACCACCGCC GGTTAACCTA
CTCGAAGAGT ACAAGAAAGA GATAGGTTAT AGCAGAGATT AG
 
Protein sequence
MICAVYKSRL KPDSYLFVEK RNDFERVPEP LMKMFGTPEL VMLLPLNKRE QLALADIEKV 
KVELAEKGYY LQLPPPPVNL LEEYKKEIGY SRD