| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2164 |
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| Symbol | |
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| ID | 4923339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2514130 |
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| End bp | 2515920 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163749 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001094289 |
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| Protein GI | 127513092 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.764228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCT ATCAAGCTCC ACTGCGCGAC TATCAGTTTA TTCTCTCCGA GCTACTTAAC
ATCTATGGGC GCGATGACCT TCAGGGATTC GATGAGATCG ACGCCGAGCT TACTGACGCC
ATTCTTCAAG GGGTCGCCGA CTTCACCACA GAGATCATGC TGCCGCTCAA CAGCCAGGGC
GATACCCAGG GCTGCCAGCT GGTGGATGGT CAGGTGCGCA CCCCCGAAGG CTTTAAAGAC
GCCTATCAAC AATACGTAGA TAACGGCTGG GCGACGCTCA CCAGCGACCC AGAATATGGC
GGTCAGGGTC TTCCCGAATG TATCGGGGTG TTTGCTACCG AGATGAAGAC GGCGACCAAC
ATGGCCTTTG CCATGTATCC GGGCTTAACC CACGGTGCCT ATGCGGCGAT CCATGCCCAT
GGCAGCGACG CCCTCAAGGC CAAGTACCTC GAGAAGCTGG TGTCGGGTGA ATGGACCGGC
ACCATGAACC TGACAGAGGC CCATGCGGGC ACGGATCTGG CACTGCTGCG CACCAAGGCT
AAGCCGGTGG GCGAAGACAC CTATGCCATT AGCGGTGAGA AGATCTTTAT CTCATCTGGC
GATCACGACC TGGCCGACAA CATAGTGCAC CTGGTGCTGG CGCGTCTGCC CGATGCGCCC
GATGGCGTGA AGGGGATCTC TCTGTTTGCC GTGCCCAAAT ATCTGGTGAA TGACGATGGC
ACCTTAGGTT GCCGCAACGG TGTCGAGGCC AGTGCCCTTG AGCATAAGAT GGGGATCCAC
GGTAACTCTA CCTGCGTCAT GGTGTTCGAC GGCGCCATCG GCGAGCTGGT GGGCGAACCC
CATCAGGGGC TGAGGGCCAT GTTTACCATG ATGAATGAGG CGAGACTAGG CGTGGGCGTG
CAGGGGCTCG GGGTCTCTGA GATCGCCTAT CAAAATGCCC TGAGTTACGC CAGAGAACGT
CTGCAGGGGC GCGCCTTAAG TGGCGTCAAG GAGAGCGAGT CACCGGCCGA TCCGATTCTG
GTTCATGGCG ATGTCAGACG CATGTTGATG GCTCAGAAGG CCTTCAACCA AGGCGCCAGA
GCCCTGATGG GTCAGCAGGC ACTTTGGCTC GACGAGTCTC ACCGTCATCA GGACAAGGCC
AAGGCGACCA TCGCGGCCAA GTTAGCGGCG CTTTTTACCC CAGTGGTGAA AGGCTTCGTG
ACCGATCAAG GCTTTAAGGC CTGTGTCGAT GCCCAGCAGG TCTATGGAGG CCATGGCTAT
ATTCACGAGT GGGGCATGGA GCAGTTTGTG CGCGATAGCC GCATCGCCAT GATCTACGAA
GGTACCAACG GCGTGCAGGC GCTAGACCTC GTTGGGCGTA AACTGCTTGC GGATAAAGGG
GAGGCGCTGG GGCTCTGGTC TGAGATGGTT AAGCCGTTCG TGGCCAAATA TCTCGAAGAT
GAGGCGCTGA AACCTTACCT GATGCCGCTG ATGGAGGCCA CGACCGATCT CGAGAAGGCG
ACCCAGTATA TCGTCGCCAA CGGGGTGAAG AATCCCGACA TCATAGGCGC CGCCTCCATG
GGCTATCTGC AGATCCTGGG TATAGTGGCT CTGGGCTGGA TGTGGGCGCG CATGGCGGTC
AAGTCTCAAC AGGCCATGAC GGCGGGCGAA GAGGAGGCAT TCTACGCCAA CAAGCTAGTG
ACGGCGAAAT TCTATATGAG TTACTGGGCG CCTCAGACTA GGAGTATTCG CTATCAGATG
GAGCGTAGCT GTGAGCTGCT GACTCAGTTA CAAGACAGCG ATTTCGACTA G
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| Protein sequence | MPIYQAPLRD YQFILSELLN IYGRDDLQGF DEIDAELTDA ILQGVADFTT EIMLPLNSQG
DTQGCQLVDG QVRTPEGFKD AYQQYVDNGW ATLTSDPEYG GQGLPECIGV FATEMKTATN
MAFAMYPGLT HGAYAAIHAH GSDALKAKYL EKLVSGEWTG TMNLTEAHAG TDLALLRTKA
KPVGEDTYAI SGEKIFISSG DHDLADNIVH LVLARLPDAP DGVKGISLFA VPKYLVNDDG
TLGCRNGVEA SALEHKMGIH GNSTCVMVFD GAIGELVGEP HQGLRAMFTM MNEARLGVGV
QGLGVSEIAY QNALSYARER LQGRALSGVK ESESPADPIL VHGDVRRMLM AQKAFNQGAR
ALMGQQALWL DESHRHQDKA KATIAAKLAA LFTPVVKGFV TDQGFKACVD AQQVYGGHGY
IHEWGMEQFV RDSRIAMIYE GTNGVQALDL VGRKLLADKG EALGLWSEMV KPFVAKYLED
EALKPYLMPL MEATTDLEKA TQYIVANGVK NPDIIGAASM GYLQILGIVA LGWMWARMAV
KSQQAMTAGE EEAFYANKLV TAKFYMSYWA PQTRSIRYQM ERSCELLTQL QDSDFD
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