Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2158 |
Symbol | |
ID | 4923330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2503215 |
End bp | 2504945 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640163743 |
Product | gamma-glutamyltransferase |
Protein accession | YP_001094283 |
Protein GI | 127513086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.148613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCCAA TAAAAACCTT ACTCTTTGCC ATCAGCCTCA GCCTGCCGCT CGTCGCAGGT CAGTTTGCCC AGGCCACCGA ATCCTCCATC TATAGCCACA GCGCCACTGT GCAGCCCATC TGGGCCAAGC ACGGCATGGT GGCCAGCCAG GAGGCCGTAG CCACTCAAGT CGGGGTCGAT ATTCTCAAGC AAGGCGGTAA CGCGGTCGAT GCGGCGGTCG GCGTCGGCTT TGCCCTGGCG GTCACCCTGC CAAGGGCCGG CAACATAGGC GGTGGCGGTT TCATGCTGGT GCATCTGGCC GAGGGCAACA AGACGGTCGC CATCGATTAT CGCGAGGTTG CCCCCAAACG CGCCCACAAG GACATCTTCC TTAATGAGCA GGGTGATGCG GTCGCCAAGC TCAGCCGCGA ACATGGCCTG GCTGTAGGCG TACCCGGCAC CGTCATGGGG ATGGAACTGG CCCTTAAGAA ATATGGCACC ATGACCATGG CCCAGGTGAT CGAGCCCGCC ATCAAGCTTG CCGAGCAAGG CATCACAGTC ACCCCGGATC TCGCCACCTC CCTTGCCGGG CTTAAACGCC GCATCTCTCA GTGGCCAAGC TCCAAGGCGA TCTTCTATCG CCCAGATGGC AGCAACTTCG AGATAGGTGA CACCCTCAGC CAAAAGGCGC TGGCCCACTC ACTCAAGCTG ATCAAGGCCC AAGGCAGCAA GGGATTCTAT GAGGGCGAAA CCGCCGAGAA GATAGTCGCC AGCGTCACCC AGGCCGGCGG CATCATGACC TTAGATGATC TTAAAGGCTA TCGTGTGGTC GAGCGTCAAC CTGTCCAGGG CGAGTATCGC GGCTACCAGG TGATCTCCAT GCCGCCCCCC TCATCCGGTG GCATACATAT TATCGAGATG CTCAACATGC TCGAGCCTTA CCCCATCGCC AAGTTAGGCC ATAATACCGC CGACACCCTG CATTTGATGG CCGAGGTGAT GAAACGCGCC TATGCCGATC GCAGCGAATA TCTGGGGGAT CCCGATTTTG TTGAGGTACC GGTGAAAGCG CTCATCAGTA AAGATTATGC CAAGTCCCGC GCCAAGGGGA TCGCCATCAA CCGCGTCACC CCAAGCAGCG AAATCGCTCC GGGCAAGCTC GCAGGTTACG AAAGCCCACA GACCACCCAC TACTCTGTGG TCGATAAGTG GGGCAATGCG GTGGCCAACA CCTACACCCT CAACTTCAGC TATGGCTCGG GCCTGGTGGC CGAAGGCACG GGCATTCTGC TCAACAATGA GATGGACGAT TTCTCAGCCA AACCCGGCGT ACCTAATGGC TATGGCCTGA TCGGCGGCGA TGCCAATGCG GTCGAAGGCG GCAAGCGCCC CCTCAGCTCT ATGAGCCCAA CTATAGTGAT GAAAGACGGC AAGCCCTTCA TCGTCACCGG CAGCCCAGGT GGGTCACGCA TCATCAACAC CACACTACAA ATCATCATGA ATGTGATCGA TCATGGACTC AATATCGCCG AAGCCAGCTA CGCTAGCAGG GTGCATCACC AATGGCTGCC CGACGAGCTG AGAGTGGAGA AGAGCCTCAA TCGCGACACC ATCTCGCTAT TGGAAGCCAG AGGCCACAAG GTCAGCGTCA AAGATGCCAT GGGCTCGACC CAGTCGATCA TGATCACCGA CGAAGGCCTG TTTGGCGCCT CAGATCCTCG CCGCGCCGGC AGTGCGACAG CGGGTTACTA G
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Protein sequence | MRPIKTLLFA ISLSLPLVAG QFAQATESSI YSHSATVQPI WAKHGMVASQ EAVATQVGVD ILKQGGNAVD AAVGVGFALA VTLPRAGNIG GGGFMLVHLA EGNKTVAIDY REVAPKRAHK DIFLNEQGDA VAKLSREHGL AVGVPGTVMG MELALKKYGT MTMAQVIEPA IKLAEQGITV TPDLATSLAG LKRRISQWPS SKAIFYRPDG SNFEIGDTLS QKALAHSLKL IKAQGSKGFY EGETAEKIVA SVTQAGGIMT LDDLKGYRVV ERQPVQGEYR GYQVISMPPP SSGGIHIIEM LNMLEPYPIA KLGHNTADTL HLMAEVMKRA YADRSEYLGD PDFVEVPVKA LISKDYAKSR AKGIAINRVT PSSEIAPGKL AGYESPQTTH YSVVDKWGNA VANTYTLNFS YGSGLVAEGT GILLNNEMDD FSAKPGVPNG YGLIGGDANA VEGGKRPLSS MSPTIVMKDG KPFIVTGSPG GSRIINTTLQ IIMNVIDHGL NIAEASYASR VHHQWLPDEL RVEKSLNRDT ISLLEARGHK VSVKDAMGST QSIMITDEGL FGASDPRRAG SATAGY
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