Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2144 |
Symbol | |
ID | 4923364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2489931 |
End bp | 2490884 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163729 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_001094269 |
Protein GI | 127513072 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000067765 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAG TGCTAGAGAG TGTCGATCAG CGTACCCAGT TGGTTGGCGA AAACCGTCTC GAGCTGTTGC TGTTTCGTAT CAATGCGACG CAGCTGTTTG CGATCAATGT GTTTAAGGTC AAAGAGGTGG TTAAGCTGCC GAAGCTGAGT GCCTTACCCG GTAGCCATCC TAGCATCAAG GGGGTCGCCA ACATTCGTGG CACCTCGATT CCCGTTATCG ATCTTCGCGC CGCCATCGGT TTTCAGCCCA TGAACAGCGA CCAGGAAGCA AACCTTATCA TCACCGAATA TAACCGCAGC GTGCAGGGCT TCATGGTCGG CAAGGTCGAC CATATCATCA ATATGACCTG GAGCGACATC ATGCCGCCGC CCAAGAGCAC AGGCAGTCAT AACTATCTGA CTGCCATCAC TAAGGTGGAG GTAGATGGCG CGACTCGTCT GGTCTCCATT ATCGATGTGG AGAAGGTGCT GGCGGAAATC GTGCACTATG ATATCGCCAT CTCGGAAGGG GTATTGGATG AGGCCTTGGT GGATAAGATG ATAGGGCGCA AGATCTTAAT TGCCGACGAC TCTGCTACCG CCCGCCGACA GGTAAAAGAT ACGCTAGCGC CACTGGGTAT TGAGGTGATA GAGACCTCGG ATGGCCTGCA GGCACTTAAG CTGTTGAAGC GTTGGTGCGA CGAGGGGCGT GATATCAACC AAGAGATACT CATGCTGATC ACCGACGCCG AGATGCCCGA AATGGACGGT TATCGTCTCA CCTATGAGGT ACGTAACGAC AAGCGGATGG CCAATCTCTT TATTACCCTC AATACCTCGC TGAGTGGCAG CTTTAACAAT GCCATGGTGG AGAAGGTGGG ATGCGATCGC TTTATCTCAA AATTCCAGCC GGATCTGCTG GTGGATGTGG TGCAGGAGCG TCTACGTACT CAGTTGCCCG AACAGGTAAA TTAA
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Protein sequence | MAKVLESVDQ RTQLVGENRL ELLLFRINAT QLFAINVFKV KEVVKLPKLS ALPGSHPSIK GVANIRGTSI PVIDLRAAIG FQPMNSDQEA NLIITEYNRS VQGFMVGKVD HIINMTWSDI MPPPKSTGSH NYLTAITKVE VDGATRLVSI IDVEKVLAEI VHYDIAISEG VLDEALVDKM IGRKILIADD SATARRQVKD TLAPLGIEVI ETSDGLQALK LLKRWCDEGR DINQEILMLI TDAEMPEMDG YRLTYEVRND KRMANLFITL NTSLSGSFNN AMVEKVGCDR FISKFQPDLL VDVVQERLRT QLPEQVN
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