Gene Shew_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2126 
Symbol 
ID4923492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2464627 
End bp2465538 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content58% 
IMG OID640163711 
ProductATPase 
Protein accessionYP_001094251 
Protein GI127513054 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATA CCAGCATCAC GGCGATCTTA AACCAGCTGC AACGCGTGCT TCTGGGTAAA 
CCCCATCAGA TAAAATTGGC CCTCACCTGC ATCCTCGCTA AGGGACACCT TCTTATCGAA
GATCTGCCCG GCATGGGCAA GACCAGTCTC TCCCAGGGGA TGGCCCAGAG CCTGGGGCTT
AGCCATCAGC GCATCCAATT TACCAGCGAT ATGCTGCCGG CGGATATTCT CGGCGTCTCC
ATCTTCGACA AGGAACAGTC CCAGTTTGTG TTCCATCCAG GTCCCATCTT CAAGCAGATG
ATCCTGGCCG ATGAGATTAA CCGCGCCAGC CCCAAGACCC AGAGCGCGCT GCTTGAGGCC
ATGGCCGAGC AGCAGATCAC GGTCGATGGC GTTACCCACG CCCTGCCCAG CCCCTTCTTC
GTGATCGCTA CCCAGAACCC CAGCGAACAG TCGGGTACCT TTCCCCTGCC GGAATCCCAG
CTCGACCGCT TCATGATGCG GATTTCCATC GGCTATCCCG ACGAGACCGC CGAGTTGGCC
ATGCTGAAGG GGGAAGATAT CTCACCTCAG CAGCAACACC TGCCCGCCTG TGTCGACCCA
CTCACCTTGA TTGAGTTGCA GTCTCAGGTG ACTAAGGTTA AGGCCTCTGA GGCGCTGCTC
AACTATATTC TCGCCCTGGT AAAAGGCTCA CGCCAGCTCA ACGAAGGTTA CGGGCTGTCG
CCCAGGGCCA GCAAGGCGCT GCTCAACGCC GCCAAGGCCT GGGCCTTCAT TCAGGGACGC
AACTATCTGG TGCCCGACGA TGTGCAGGCG GTGTTTGCCT CTGTCGCCGA ACACAGGCTA
AGGCACACCA GCCAGCAACA GGGCGAGGCC CTCTCTCAGC GCTTGCTCGC CAGTACCAAT
CCTATCTTGT AA
 
Protein sequence
MSHTSITAIL NQLQRVLLGK PHQIKLALTC ILAKGHLLIE DLPGMGKTSL SQGMAQSLGL 
SHQRIQFTSD MLPADILGVS IFDKEQSQFV FHPGPIFKQM ILADEINRAS PKTQSALLEA
MAEQQITVDG VTHALPSPFF VIATQNPSEQ SGTFPLPESQ LDRFMMRISI GYPDETAELA
MLKGEDISPQ QQHLPACVDP LTLIELQSQV TKVKASEALL NYILALVKGS RQLNEGYGLS
PRASKALLNA AKAWAFIQGR NYLVPDDVQA VFASVAEHRL RHTSQQQGEA LSQRLLASTN
PIL