| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2111 |
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| Symbol | |
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| ID | 4923595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2446949 |
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| End bp | 2447677 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163696 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001094236 |
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| Protein GI | 127513039 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000449377 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATTA TCTCCAATGC TAAGCGCCAA GTAATTCTCG ATACCGAAAC CACGGGTATG
AACCAAGGGG CCGGTGCCGT CTATTTTGGC CATCGTATTA TCGAGATAGG CTGTGTCGAG
GTGATTAACC GTAAGCTGAC CGGCCGCCAT TTTCACGAAT ATATCAATCC GATGCAGGCG
ATCGACGAAG AGGCGATCAC GGTGCACGGT ATCACCAACG AGTTTGTGGC CGATAAGCCT
GTGTTTGCCC AGATAGCGCC TGCCTTCCTC GAGTTTATCG ACGGCGCCGA GATTGTGGCC
CATAACGCGA ACTTCGACGT GAGCTTCATG GACCATGAGT TTTCGCTGCT TACCCCCAGA
GGACCCAAGA CCACAGATAT CTGTCAGGTG TTGGATTCGC TGGAGATCGC CAAGTTTCTT
CACCCAGGTC AGAAGAATAA CCTGGACGCC CTGTGTAAGC GCTACGGCAT AGATAACTCA
CGCCGCGAAC TCCACGGCGC ATTGTTGGAT GCCGAGATCC TGGCCGATGT TTATCTCATC
ATGACGGGGG GGCAGACCAA GTTTGAACTC TCAAATGAGA AGCCGGGGCA GGAGAGCGGT
GGCATCATAC GTCTCGCAAA TAATCGTCCA AGCCTTAAAG TGATCGGCGC ATCGGCCGAT
GAACTGAATA TGCATGAGCA AAGATTAGAT TTAGTCGAAA AATCAGGACA ATGTATTTGG
CGAGGATAA
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| Protein sequence | MNIISNAKRQ VILDTETTGM NQGAGAVYFG HRIIEIGCVE VINRKLTGRH FHEYINPMQA
IDEEAITVHG ITNEFVADKP VFAQIAPAFL EFIDGAEIVA HNANFDVSFM DHEFSLLTPR
GPKTTDICQV LDSLEIAKFL HPGQKNNLDA LCKRYGIDNS RRELHGALLD AEILADVYLI
MTGGQTKFEL SNEKPGQESG GIIRLANNRP SLKVIGASAD ELNMHEQRLD LVEKSGQCIW
RG
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