Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2076 |
Symbol | ruvA |
ID | 4923612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2400643 |
End bp | 2401260 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640163658 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_001094201 |
Protein GI | 127513004 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.438835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGTC GTTTACGGGG ATTACTCGTC GAGAAGCAGG CGCCCGAGGT GCTGATTGAA ACTGGCGGTG TCGGCTATGA GGTGCAGATG CCGCTCACCA GTTTTTACGA ATTGCCAGAA TTAAACCAAG AGGCGGTGAT CTACACCCAC TTCGTGGTGC GTGAAGATGC CCAGCTGCTG TACGGTTTCA TCACCAAGCA GGAGAGGGCG CTGTTCAGGC TGCTGATCAA GACCAATGGC GTCGGTCCTA AGCTGGCACT GACCATACTC TCTGGCATGA CGGCGGGCGA ATTTGTGAAA TGCGTCGAGC ATGACGATAT CGCAACCCTG GTTAAGCTGC CGGGTGTCGG CAAGAAGACT GCGGAGCGTC TGTTGGTTGA GATGCGCGAC AAGCTTAAGA GCCTGATGGA AGCGTCCCAT GGCAACGAGC GCGAGTTTGT GTTGCAGTCT AACTATACTC CTGCGCCTGT GGTTAACACT GCCGAAGAAG ATGCCATCTC GGCGCTTTTG GCGTTAGGAT ATAAGCCGGC ACAGGCCAGT AAGGCGGTGT CCAGTGTCTT CGAAGAGGGC ATGGATTCAG AAACCTTGAT CAAGGCATCG CTGAAATCGA TGCTCTAG
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Protein sequence | MIGRLRGLLV EKQAPEVLIE TGGVGYEVQM PLTSFYELPE LNQEAVIYTH FVVREDAQLL YGFITKQERA LFRLLIKTNG VGPKLALTIL SGMTAGEFVK CVEHDDIATL VKLPGVGKKT AERLLVEMRD KLKSLMEASH GNEREFVLQS NYTPAPVVNT AEEDAISALL ALGYKPAQAS KAVSSVFEEG MDSETLIKAS LKSML
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