Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2075 |
Symbol | ruvB |
ID | 4923439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2399610 |
End bp | 2400623 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640163657 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001094200 |
Protein GI | 127513003 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAG CCGATAGGTT AGTTCACGCC CAGCCCCAAG GCACAGAGGA GCGGGACGAG CAGATAGATA GGGCGATGCG TCCTAAGCTG CTGGATGAGT ACACGGGCCA GGACGATACC AGAGCCCAGC TCAAGGTGTT TATCGAGGCG GCGCAGAAGC GCGGCGAGGC CCTTGATCAT ATGTTGATCT ACGGACCTCC AGGCCTGGGT AAGACCACGC TCGCCATGAT CGTCGCCAAC GAGATGGGGG TTAACATCAA GTCCACCTCG GGCCCTGTGC TGGAGAAGGC GGGTGATCTC GCGGCCCTGC TTACCAATCT CGAGGCCGGT GACGTGCTCT TCATCGACGA GATCCACAGA CTTAGCCCTG TGGTGGAGGA GATCCTCTAC CCGGCGATGG AAGACTATCA GCTGGATATC ATGATAGGCG AGGGCCCGGC GGCGCGCTCC ATTAAGCTTG AGCTGCCTCC CTTTACCCTG ATTGGTGCAA CTACTCGCGC CGGCGCACTG ACATCGCCGC TGCGTGCCCG TTTTGGCATC CCCCTGCGTC TCGAGTTCTA TAACGTCAAA GATCTTAGCA GTATTGTCAC GCGCTCGGCC AAGGTGCTTG AGCTGCCGAT CGATCAAGAA GGCGCGGTAG AGGTCGCCAG ACGTTCTCGC GGCACGCCGC GTATCGCTAA CCGTTTGCTT AGACGGGTGC GAGACTACGC CGAGGTGAAG CACGATGGCG AGGTCAACAA GGTGGTCGCC GAGAGCGCTT TGGATATGCT GGATGTGGAT GTCGAAGGCT TCGATTATAT GGACCGTAAG CTGCTGCTGG CCATCATAGA TAAGTTTATG GGCGGCCCTG TGGGCCTGGA TAACCTGGCC GCGGCCATCG GCGAAGAGCG TGAGACTATC GAAGATGTGC TCGAACCCTT TCTGATCCAG CAAGGCTTCA TCCAGCGCAC CCCAAGAGGG CGTATCGCGA CGGCGAGAGC CTATCAGCAC TTCAACCTGA TCCAGCCGGA ATAA
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Protein sequence | MIEADRLVHA QPQGTEERDE QIDRAMRPKL LDEYTGQDDT RAQLKVFIEA AQKRGEALDH MLIYGPPGLG KTTLAMIVAN EMGVNIKSTS GPVLEKAGDL AALLTNLEAG DVLFIDEIHR LSPVVEEILY PAMEDYQLDI MIGEGPAARS IKLELPPFTL IGATTRAGAL TSPLRARFGI PLRLEFYNVK DLSSIVTRSA KVLELPIDQE GAVEVARRSR GTPRIANRLL RRVRDYAEVK HDGEVNKVVA ESALDMLDVD VEGFDYMDRK LLLAIIDKFM GGPVGLDNLA AAIGEERETI EDVLEPFLIQ QGFIQRTPRG RIATARAYQH FNLIQPE
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