Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2051 |
Symbol | |
ID | 4923735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2368011 |
End bp | 2370287 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640163626 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001094176 |
Protein GI | 127512979 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.217248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.456304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCT TTATCCTGGC ACTATTGGTC ATCATAGTGC TTTTTGGCGT GAAAAATATC CGTATGCAGT GCATCACGCG GCCCGTATTC GCCTTCTTTA AGAAGGTGTT GCCTCCGCTC TCCGATACCG AGAAAGAGGC GATGGAAGCC GGCGATGTTT GGTGGGAAGC CGAGCTATTT CGTGGCAAGC CCAACTGGGA TACGCTGCAC AGCTACGGCC GTCCAAGGCT GACCGAAGAG GAGAAAGCCT TTATCGATGA GCAGGTCATG ACGGCCCTGA CTATGATTGA TGACTTCAAC ATAGTGCAGG AGCGTAAAGA TCTGCCGCCC GAGCTGTGGG ACTACTTCAA GAAAGAGGGC TTCTTCGCCC TGATCATCCC CAAAGAGTAT GGCGGTAAGG CCTTCTCTGC CTATGCCAAT TCAACCATCG TCAGCAAGCT TGCCAGTCGT AGCGTGAGCG CGGCGGTAAG TGTGATGGTG CCAAACTCCT TAGGCCCTGG CGAACTGCTG ACCCACTATG GCACCAAGGA GCAACGCGAT CACTGGCTGC CGAAACTGGC CAGTGGTGAA GCCGTGCCTT GTTTTGCCCT GACAGGCCCC GAGGCGGGTT CAGATGCGGG CGCCATTCCC GATACCGGCA TAGTCTGCCG CGGTGAGTTC CAGGGCGAAG AGGTGTTAGG CCTCAAGCTT AACTGGGACA AGCGTTATAT CACCCTGGCT CCGGTATCGA CGGTATTGGG GCTGGCTTTC CAGATGCGTG ACCCTGAAGG CCTGCTTGGA GACAAAGAAG AGATAGGGAT CACCTGTGCT CTGATCCCAA CGGATCATCC CGGCGTTGAG ATAGGTAATC GTCACAACCC GCTTAACATG GGCTTCATGA ATGGTACGAC TCGCGGCGAG GATGTCTTCA TTCCGCTGGA TTGGATCATT GGTGGGCCGC AATACGCGGG ACGGGGCTGG CGCATGCTAG TCGAGTGTCT CTCGGCCGGT CGCGGCATCT CGCTGCCCGC CTTGGCGACG GCTTCCGGTC ATGTCACCAC TAAGACCACG ACTGCTTACA GTTATGTACG CCATCAATTT GGCTTGTCGC TCGGCCAGTT TGAAGGGGTG CAAGAGGCCC TGGCGCGTAT TATCGCCAAC ACCTATCAGC TAGAGGCGGC GCGCCGTCTG ACTACCACGG GGATCGATCT TAAGGTCAAG CCTTCTGTGG TTACCGCCAT CGCCAAGTAT CACATGACAG AGATGGGCCG GGATGTGCTC AACGATGCCA TGGATATTCA ATCGGGCAAG GGGATCCAGC TTGGGCCTAA GAACTATCTA GGTCATGGCT ATATGGCCAC GCCGATATCG ATCACGGTAG AAGGGGCGAA CATTCTTACC CGCAGCCTGA TGATCTTCGG TCAGGGGGCG ACACGTTGTC ATCCTTACGT ACTGGCCGAG ATGGAAGCCG CGGCCATGGA AGATACCGGC GAGGCGTTAG AGCGCTTCGA TAATCTGCTG CTGGGTCACA TGGGCTATGC GGCACGTAAT GCCCTGAGTT CACTATGGGG CGCCTTAACC GGCAGCCGAT TCAATTCGGC GCCCGTATCC GGCGAAACCA AACAGTACTA CAAGGATATG ACTCGTCTGT CGGCAGCGCT CGCCTTCGTC ACCGATCTCT CCATGTTGGT GATGGGCGGC GATCTCAAGC GCAAGGAGAT GTTGTCGGCG CGCCTTGGTG ATGTGCTCAG CGAACTCTAC CTGGGCTCGG CCACCCTCAA GCTGTTCGAA GACAATGGCC GTCAGCAGGA CGACCTGCCG ACCGTACACT ATGTGATGCA GCTTAGGTTG CAAAGGGCGG CTAAGGCGCT TTATGGCGCG CTGCGTAACT TCCCCAATCG CCCACTGGCC TATGCGATGC GTGCCTTGGT GTTCCCTCTG GGTAACCATT TCAATGGTCC GGACGACAAG CTCACCATTG CCGTGTGTCA GAGCATGCTC AGACCCGGTC CGGCTCGCGA TAGGTTGACC CATCTGTGCC CAGATTTCGA AGGGGATAAT GGCGGGATCG CCGAGGTGGA AGATGCGTTT ATCGCTCAGT ACAAGGCAAA GCATCTGTTT AAGACGCTGC GCAATGCCCA GAAGGAAGGC AAGCTTGAGC GTAAACAGGC TAACGATGCC CTGTATGCCC AAGCCTATGA GCTTAAGATC ATTACTGAGG CAGAGCACGA CACGCTACTC GAGGCCGATA GGCTACGTAA GATAGCGATT GCTGTGGATG AGTTTGAAAG CCTCTAA
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Protein sequence | MTLFILALLV IIVLFGVKNI RMQCITRPVF AFFKKVLPPL SDTEKEAMEA GDVWWEAELF RGKPNWDTLH SYGRPRLTEE EKAFIDEQVM TALTMIDDFN IVQERKDLPP ELWDYFKKEG FFALIIPKEY GGKAFSAYAN STIVSKLASR SVSAAVSVMV PNSLGPGELL THYGTKEQRD HWLPKLASGE AVPCFALTGP EAGSDAGAIP DTGIVCRGEF QGEEVLGLKL NWDKRYITLA PVSTVLGLAF QMRDPEGLLG DKEEIGITCA LIPTDHPGVE IGNRHNPLNM GFMNGTTRGE DVFIPLDWII GGPQYAGRGW RMLVECLSAG RGISLPALAT ASGHVTTKTT TAYSYVRHQF GLSLGQFEGV QEALARIIAN TYQLEAARRL TTTGIDLKVK PSVVTAIAKY HMTEMGRDVL NDAMDIQSGK GIQLGPKNYL GHGYMATPIS ITVEGANILT RSLMIFGQGA TRCHPYVLAE MEAAAMEDTG EALERFDNLL LGHMGYAARN ALSSLWGALT GSRFNSAPVS GETKQYYKDM TRLSAALAFV TDLSMLVMGG DLKRKEMLSA RLGDVLSELY LGSATLKLFE DNGRQQDDLP TVHYVMQLRL QRAAKALYGA LRNFPNRPLA YAMRALVFPL GNHFNGPDDK LTIAVCQSML RPGPARDRLT HLCPDFEGDN GGIAEVEDAF IAQYKAKHLF KTLRNAQKEG KLERKQANDA LYAQAYELKI ITEAEHDTLL EADRLRKIAI AVDEFESL
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