| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2031 |
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| Symbol | |
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| ID | 4923870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2343971 |
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| End bp | 2344492 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640163604 |
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| Product | translation initiation factor IF-3 |
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| Protein accession | YP_001094156 |
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| Protein GI | 127512959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
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| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00250222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000245728 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGTAAAG CAGCGGCGAA TAGAATTAAC GAACTCATTG TTGGCGTATC AGAAGTACGC
CTCAATGGAT TAGACGGTGA AACTATCGGC ATTGTAAGTC TTCGTGAAGC GCAAGAACTT
GCAGATGAAG CGGGCGTAGA TCTCGTAGAG ATCAGCCCAA ACGCTGAGCC GCCTGTATGT
CGCATAATGG ACTACGGAAA GTATCTTTTT GACAAGGCTA AGGCCCAAAA AGAGCAAAAG
AAGAAGCAGA AACAGATACA GGTGAAGGAA ATAAAATTCC GTCCCGGTAC TGACGAAAAC
GACTATCAGG TAAAACTACG CAACCTGAAG CGTTTTCTAG AAGACGGCGA CAAGGCGAAA
GTTACGCTGC GTTTCCGTGG TCGCGAGATG GCTCACCAGA GTCTTGGTAT GAATCTTTTG
AATCGTATTA AAGACGACTT GGCTGAGATA GCAGTTGTGG AGGCTTTTCC AAAAATGGAA
GGTCGCCAGG CTGTGATGGT GCTCGCGCCG AAAAAGAAAT AG
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| Protein sequence | MRKAAANRIN ELIVGVSEVR LNGLDGETIG IVSLREAQEL ADEAGVDLVE ISPNAEPPVC
RIMDYGKYLF DKAKAQKEQK KKQKQIQVKE IKFRPGTDEN DYQVKLRNLK RFLEDGDKAK
VTLRFRGREM AHQSLGMNLL NRIKDDLAEI AVVEAFPKME GRQAVMVLAP KKK
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