Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2030 |
Symbol | rpmI |
ID | 4923869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2343689 |
End bp | 2343883 |
Gene Length | 195 bp |
Protein Length | 64 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640163603 |
Product | 50S ribosomal protein L35 |
Protein accession | YP_001094155 |
Protein GI | 127512958 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0291] Ribosomal protein L35 |
TIGRFAM ID | [TIGR00001] ribosomal protein L35 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000722543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000219314 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTAAAA TGAAAACAGA CAAGGGTGTA CAAAAGCGTT TTAAGAAAAC CGCTAACGGT TTTAAGCGCA AGCAAGCCCA TTTACGTCAT ATTTTGACCA AGAAGAGCAC TAAGCGTAAA CGTCACTTAC GTGCTAAATG TTTAGTTGCG AAGTCTGATG TGCCAGCAAT TGCACGTCAA CTACCATACG CTTAA
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Protein sequence | MPKMKTDKGV QKRFKKTANG FKRKQAHLRH ILTKKSTKRK RHLRAKCLVA KSDVPAIARQ LPYA
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