Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1983 |
Symbol | |
ID | 4921011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2295234 |
End bp | 2296805 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640163552 |
Product | response regulator receiver modulated metal dependent phosphohydrolase |
Protein accession | YP_001094108 |
Protein GI | 127512911 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00722808 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATTG ATATGGCGAA AAAGAGTCCA CTGTTCTCAG GTAAGAAGAA AGCAGCCGAA ACAGAAACAG GACCGGCCTG GCGCATACTG ATCGTCGACG ATGAGCCCGA TGTACACACA GTAACAAAAC TCGCACTGTC GCGGTTTAAA CTAGATAACC GCGGCATAGA GTTTATTAAT GCCTATAGCG GCGAAGAAGC AAAGCGGGTG TTACAAGATG AAAAAGACGT GGCCATGGCG TTTATCGACG TGGTCATGGA GAGCGATCAC GCCGGTCTTG AGCTGGTCAA ATGGATCCGT GAAGAGCATA ACGACCGCAG CATCAGATTA ATCCTGCGTA CCGGTCAGCC GGGACAAGCG CCTGAAGAAG ATGTGATCGT CAATTACGAC ATCAACGATT ACAAGGCAAA GGCTGAATTG GATTCACGTA AGCTGATCAC CAGCGTCTAC TCCGCGCTGA GAAGTTACCG CGATATCATG GAGATCGAAG CGGCGAAACA AACGCAAATC CGCTACCGAG AGGGGCTAGA GCGTGTCGTC AAGGCGACCT CTGGCCTGTT TGAACTCAGA ACTCTGTATC ATTTTGCCGA CGGTCTGCTG ACTCAGGTCG CCAACCTCCT TAACCTCAAC AACGAGACCT TACTGCTGAC CTGCAATGCC ATAGATGCGA TGAGCAAGGA TTTAAGTACC GACAAACTCC ATATCCTGGC TGGCACCGGC CAATTTGCCA GTCACCATGA ACAAGCCATC CCCGAGCCCA TCGAGAAGCT GCTTAAACGG GCACTACAGG AACAGACATG CCTGTATGAA GACAACCTAT TCGTCGGTTA CTTCCCAGCA AAGAGTGGTT GGATCAATCT TTTGTATATG GACAACATAC ATGCCATTGG CGATCTGGAT AAGAAGCTTA TCGATATCTT TGCCATCAAT GTCGGCGTCG CCTTCGAGAA CCTGCTGCTG AACAAAGAGC TAGAAGATAC CCAGTCAGAA TTGATCTTCC GCCTAGGCGA TGTGGTCGAG AGCCGCTCGA AGGAAGCCGC CAACCATGTG AAGCGTATGG CCGAGTACTG TTATATCCTG GCAAAATTGG CCGGGCTCGA TGATCAACAG GCCGATCTCA TCAAACACGC ATCACCCATG CATGACATAG GTAAGATAGC GACGCCGGAT GCCGTGTTAT TAAAACCTGG AAAACTAAAC GATGAAGAGT GGCAGATCAT GCGTCAGCAT CCCGCCATCG GTCACCAGAT CTTGGGCAAC TCAGAGCGCC CTATTCTCAA CGCTGCCGCC ATCATCGCCT TACAACACCA TGAGAAGTAC GATGGCAGTG GTTATCCTGA TGGATTAAAA GGCGATGAAA TTCATATCTT TGCACGCATT GTTGCTATCG CAGATGTGTT CGATGCGCTA TCCCACGAGC GCTGCTATAA ACCGGCCTGG CCACTAGATG AAGTGATAGC CGAGATCGCA AAAGGTGCAG GGTCACACTT TGATCCTGAC CTTACCTCAC TCTTTATCGA TAACATAGAA CACTTCAATA AGGTGCGATT AGCCCTAACT GATAGCAATT AA
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Protein sequence | MLIDMAKKSP LFSGKKKAAE TETGPAWRIL IVDDEPDVHT VTKLALSRFK LDNRGIEFIN AYSGEEAKRV LQDEKDVAMA FIDVVMESDH AGLELVKWIR EEHNDRSIRL ILRTGQPGQA PEEDVIVNYD INDYKAKAEL DSRKLITSVY SALRSYRDIM EIEAAKQTQI RYREGLERVV KATSGLFELR TLYHFADGLL TQVANLLNLN NETLLLTCNA IDAMSKDLST DKLHILAGTG QFASHHEQAI PEPIEKLLKR ALQEQTCLYE DNLFVGYFPA KSGWINLLYM DNIHAIGDLD KKLIDIFAIN VGVAFENLLL NKELEDTQSE LIFRLGDVVE SRSKEAANHV KRMAEYCYIL AKLAGLDDQQ ADLIKHASPM HDIGKIATPD AVLLKPGKLN DEEWQIMRQH PAIGHQILGN SERPILNAAA IIALQHHEKY DGSGYPDGLK GDEIHIFARI VAIADVFDAL SHERCYKPAW PLDEVIAEIA KGAGSHFDPD LTSLFIDNIE HFNKVRLALT DSN
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