| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1915 |
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| Symbol | |
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| ID | 4921637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2213855 |
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| End bp | 2214415 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640163483 |
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| Product | elongation factor P |
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| Protein accession | YP_001094040 |
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| Protein GI | 127512843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000120633 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000167912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAAACTG CTCATGAAAT CCGTCCAGGT AACGTGATCA TGTTAGATGG CAGCCCATGG
GTTGTTCAAA AGACTGAAAC AACTCGTTCA GGCCGTAACG CGGCTATCGT TAAGATGAAA
CTGAAGAACC TACTTCAAGA ATCATCTACC GAAACCACCT TTAAGGGTGA AGACAAGATG
GAAGATATCA TTCTAGACCG TCTTGATTGT ACTTATTCTT ACTTCGCCGA TCCTATGTAT
GTCTTCATGG ATGCTGAATA CAACCAGTAC GACGTTGAAG CCGACAACCT AGGTGATGCA
GCTGCTTACA TCGTTGACGG TATGGAAGAA CAGTGCCAGG TAACTTTCTA CGAAGGTAAG
GCTATCTCTG TTGAACTGCC AACCACAGTT GTACGTGAAG TGACCTACAC TGAGCCTTCA
GCTCGTGGCG ACACCTCAGG TAAAGTTATG AAGCCTGCCA CTATCGCTGG TGGTGCAACC
CTGAGCGTTG CAGACTTCGT TAAGACTGGC GACCTGATCG AGATCGACAC TCGCACACAC
GAGTTCAAGA AGCGCGCTTA A
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| Protein sequence | MKTAHEIRPG NVIMLDGSPW VVQKTETTRS GRNAAIVKMK LKNLLQESST ETTFKGEDKM
EDIILDRLDC TYSYFADPMY VFMDAEYNQY DVEADNLGDA AAYIVDGMEE QCQVTFYEGK
AISVELPTTV VREVTYTEPS ARGDTSGKVM KPATIAGGAT LSVADFVKTG DLIEIDTRTH
EFKKRA
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