Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1912 |
Symbol | |
ID | 4921634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2210118 |
End bp | 2211443 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640163480 |
Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
Protein accession | YP_001094037 |
Protein GI | 127512840 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0232] dGTP triphosphohydrolase |
TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00809428 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000248153 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACATCAG CCATCTGGCA TGAGAGACGC TTGGGCGAAG AGAAACTCAG GCGCAACGAC CACCGCAGCC CCTATCAGCG CGATCGCGCC CGCATTCTAC ACTCGGCCGC CTTCAGACGT TTGCAGGCCA AGACTCAGGT GCTGGGTGTC GGCATGAACG ACTTCTATCG CACCCGCCTC ACCCACTCGC TGGAGGTATC GCAGATAGGC ACAGGGATCT GCGCCCAGCT CAAACAGAAA TACCCAGATC TGCATCATCT GCTCGACTCC ATGAGCCTGA TAGAATCCCT CTGTCTGGCC CACGACATAG GCCATCCTCC CTTTGGTCAC GGCGGTGAGG TCGCGCTCAA CTATATGATG CGCAGCGATG GCGGCTTCGA GGGCAACGGA CAGACATTCA GGATCCTCAC CGCGCTCGAG CCTTATACCC AGCACTTTGG CATGAACCTC ACCCGGCGTA CCTTGCTGGG GATCCTTAAA TATCCCGCCA GCCACAATGA ACTGTATCAG TCCCAGCCAA GGCCAGAGGT CGACAGCTAT CGTCAACTTA AGCCAAGCCA GTGGCGTCCG GTTAAAGGGA TCTTCTTTGA GGACAAGCCT GTGCTCGACT GGGTACTCGA GCCGCTATCG ACCCAAGACA GAGAGCGATT CGTCTCGGCA GAGCCAGGGG AAAGAGATCA ACACAGACGC ACCCGGTATA AGTCGCTCGA TTGCTCCATC ATGGAGCTCG CAGACGATAC CGCCTATGCC ATTCACGATC TCGAAGATGC CATCGTCATG GGCATCGTCA CCCAGGCCAT GTGGCAGCAA GATGTGTCCA GCCTGCTAGC GGGCAGCGAC GATGAATGGA TTGCCAAGGA GTTTGCCACC ATTGGCGATA AGCTGTTTGC GCTGGAAAAT CACCTGCGCA AAGACGCCAT AGGTACCCTG GTCAACGGTT TCGTCACCGC CATCTTGATC GATGAAAACC CCAATTTTAT CGAGCCGCTA CTCAGATATA ACGCCCGCCT GGAGCCCCCC TTCGCCGAGG CGCTCCATGT ACTTAAGCAG TTTGTCTATA AGCGGGTGAT CCGCAAACCC GAGATCCAGA TGCTGGAATA TAAGGGCCAG CAGATAGTGA TGGAGCTGTT CGAGGCCTTC GCCTCGGATC CCGAGCGTCT GTTACCGCTC AATACCCAGG AGCGCTGGCA ACAGATGGCC CAGCAAGAAG GCAACTGCAA CCGGGTGATC GCCGACTACA TCTCGGGAAT GACAGATGAG TTTGCCGCCC GCCTGCACCA ACATCTGTTT AGTGCCAAGG CGGGATCCCT GATCGATCTG CAGTAA
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Protein sequence | MTSAIWHERR LGEEKLRRND HRSPYQRDRA RILHSAAFRR LQAKTQVLGV GMNDFYRTRL THSLEVSQIG TGICAQLKQK YPDLHHLLDS MSLIESLCLA HDIGHPPFGH GGEVALNYMM RSDGGFEGNG QTFRILTALE PYTQHFGMNL TRRTLLGILK YPASHNELYQ SQPRPEVDSY RQLKPSQWRP VKGIFFEDKP VLDWVLEPLS TQDRERFVSA EPGERDQHRR TRYKSLDCSI MELADDTAYA IHDLEDAIVM GIVTQAMWQQ DVSSLLAGSD DEWIAKEFAT IGDKLFALEN HLRKDAIGTL VNGFVTAILI DENPNFIEPL LRYNARLEPP FAEALHVLKQ FVYKRVIRKP EIQMLEYKGQ QIVMELFEAF ASDPERLLPL NTQERWQQMA QQEGNCNRVI ADYISGMTDE FAARLHQHLF SAKAGSLIDL Q
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