| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1882 |
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| Symbol | |
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| ID | 4921715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2165827 |
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| End bp | 2167113 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163450 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001094007 |
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| Protein GI | 127512810 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.898808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCC CTAATTTTTC CCAAACGGCC GCACACGAAC TTCACGATAC CTTGCCCATC
TGGCGCGAAC TGATCTTCAA GCGCCTGTTT GGCCTCCTCG CCATCTTATG TGTGCCCGTC
TACATCACCA GTGTCTACCT CTGCATCCAG ATGGGTCTGG TCGGCATGGC CGCCTTTGAT
ACCCTGGCCT ACCTGTTGCT GCTCTACATC TTACTGGCGA GAGGATTGAG GCAGACCTTA
CGCTACTGCA TAGGCTGTTT GATGTTCTTC GCCATCGGCG TGGCCTTCCT TATCACCATA
GGCCCAACGG GCGCCGGGTT CTTCTGGCTG TTTATCTTCC CCCCGCTCAC CAGCATATTG
ATTGGCAAGC GGGCCAGCCT CTGCGCCCAA CTGCTTAACG CTGCGGCTCT GCTGGTCATA
GGGCTGGTCT ACCATACGCA AGGCTTTCAA TGGCCGGAGA CCCAGGGCTA TAGCAGCTTC
ATCTGGTTTG TAGTGGCGAT AAACTTCATT GTCACCAATG CCATAGTCAC TCAATCCGCC
GCCTTCCTGC TGGGTAAACT GACCCAGTCG CTGCGATCGA CCATAGCATC GCGGCGCGCA
ACCGTGATGG GGCTGGCAAA ACTGGCCGAA TACCGGGACA ACGAGACCGG CGCGCACCTG
ATCCGCATGC AGCACTACGC CAAGATGCTT GCCACTCAGC GACAAACCGA CATTGATGCC
CCAGCAGAGT TAACCGACGA TTTTATTCAG GAGATCACCC TCTCTTCGAT TTTGCATGAT
ATCGGCAAGG TGGGGATCGC CGATGCCATC TTGCTCAAGC CCGGACGACT GACAGAAGAG
GAGTTTGAGC AGATCAAGGC GCACCCGGTT ATTGGCGCTC AGGTATTAGC GAGTCTGCTT
AGTTACGCGC CAGAGTGTCC TTACATAAAG ATGGGGCGTG ATATCGCCGG TGGGCATCAT
GAGTGGTGGG ATGGCAGCGG CTATCCGGCC GGGCTCCAGG GGGAAGCGAT TCCCCTCTCG
GCCCGTATCG TCGCCCTAGT AGATGTGTAT GACGCCCTGA CCTCGCCGCG CTGCTACAAA
CGCCCCTTTA GTCATCAAGA AGCGCTGGAA TTAATCCATC AGGATAAAGG CACCCATTTT
GACCCTAAGC TGGTTGAGAG CTTTATCGCC ATCAATCACA GGTTCGAACT GCTGTCGAAG
GCATCTCTGT TCGAGCGGCC ATCCAAGCAG CCACTCAGAG GCCAGGTCGC CGTCGCGAGC
GAATCGGAGC TAGAAACGAG CCAGTAG
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| Protein sequence | MDAPNFSQTA AHELHDTLPI WRELIFKRLF GLLAILCVPV YITSVYLCIQ MGLVGMAAFD
TLAYLLLLYI LLARGLRQTL RYCIGCLMFF AIGVAFLITI GPTGAGFFWL FIFPPLTSIL
IGKRASLCAQ LLNAAALLVI GLVYHTQGFQ WPETQGYSSF IWFVVAINFI VTNAIVTQSA
AFLLGKLTQS LRSTIASRRA TVMGLAKLAE YRDNETGAHL IRMQHYAKML ATQRQTDIDA
PAELTDDFIQ EITLSSILHD IGKVGIADAI LLKPGRLTEE EFEQIKAHPV IGAQVLASLL
SYAPECPYIK MGRDIAGGHH EWWDGSGYPA GLQGEAIPLS ARIVALVDVY DALTSPRCYK
RPFSHQEALE LIHQDKGTHF DPKLVESFIA INHRFELLSK ASLFERPSKQ PLRGQVAVAS
ESELETSQ
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