| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1856 |
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| Symbol | |
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| ID | 4924359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2135122 |
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| End bp | 2135859 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163424 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001093981 |
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| Protein GI | 127512784 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000400119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000223856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAATGTGA CTCTGTTAAT CCCTGCTCGC TATGGCTCAA GCCGTTTTCC GGGTAAGCCA
TTGGCGCCGA TTAACGGTAA GCCGATGATC CAGCACGTTT ACGAGCGTGC GGCGCTGGCA
AAAGGCTTAA CTGCCATCTA TGTGGCCACC GACGATCTGC GCATCAAGGA GGCCGTTGAA
GCCTTTGGCG GTAAGGTAGT CATGACAGAT GCCAATGCTG CCTCCGGCAC CGACAGAATC
GAGGATGCAA TCACCCAGCT TGGCTTGGCG GACGATGACC TGGTGATCAA CCTCCAGGGC
GATCAGCCGC TGATCGATCC TATCTCCATC GAGCAGATCA TCACACTGTT TGAGCGTCAT
CCAGGGGAGT TCGGCATGGC AACCCTAGGC TATGAGATCA CCGAAGAGCA TGAGCTTAAC
GATCCCAAGC ACGTCAAGAT GGTGTTCGAC AACCAATTTA ACGCCCTCTA TTTCTCTCGT
GCCCGCATCC CCTTCGGCCG TGATACAGAT GACTACCCGG TCTACAAACA CCTGGGCGTG
TATGCCTACA CCCGCGAGTT TGTCAGAACC TTCAATAAGC TGCCACTTGG CCGTTTAGAA
GATCTCGAAA AGCTTGAGCA GCTGCGCGCA CTGGAACATG GCCACACGAT CAAGGTTGCC
ATCAGCGCCT TCGACTCGCC CGAGGTCGAT ACCCCAGAAG ATATTCGCAT CTGCGAAGCA
CGCCTTGCGG TAGACTAG
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| Protein sequence | MNVTLLIPAR YGSSRFPGKP LAPINGKPMI QHVYERAALA KGLTAIYVAT DDLRIKEAVE
AFGGKVVMTD ANAASGTDRI EDAITQLGLA DDDLVINLQG DQPLIDPISI EQIITLFERH
PGEFGMATLG YEITEEHELN DPKHVKMVFD NQFNALYFSR ARIPFGRDTD DYPVYKHLGV
YAYTREFVRT FNKLPLGRLE DLEKLEQLRA LEHGHTIKVA ISAFDSPEVD TPEDIRICEA
RLAVD
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