Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1831 |
Symbol | |
ID | 4922093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2106265 |
End bp | 2107797 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640163399 |
Product | SpoVR family protein |
Protein accession | YP_001093956 |
Protein GI | 127512759 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAA AAAAGAAGCG CACTGTATTA AATGACGGCC CGGACTGGAC CTTCGAGCTG TTGGAATCTT ATCTTACCGA GATAGAGCGG GTGGCGGATC ACTACCGTCT GGATACTTAT AAGAACCAGA TTGAGGTGAT CACCGCCGAG CAGATGATGG ATGCCTATGC GGGGATCGGC ATGCCCATAG GCTATACCCA TTGGTCCTTT GGTAAGAAGT TTATCGAAAC AGAGCAAGGC TATAAGCGTG GCCAGATGGG GCTGGCCTAC GAGATAGTGA TCAACTCTGA TCCTTGTATC GCCTACTTGA TGGAGGAGAA TACTATTACC ATGCAGGCGC TAGTGATGGC GCACGCCTGT TTCGGCCACA ACAGCTTTTT TAAGAGCAAC TATCTGTTTA AGACCTGGAC CGACGCCAGC TCTATCATCG ACTATCTGGT GTTTGCCAAA AACTATGTCA GGGAGTGTGA GGAGCGCTAT GGTGAGGAGC AGGTAGAGTT AGTACTGGAC TCTTGCCACG CCCTGATGAA CTACGGCGTC GATCGCTACA AGCGCCCTAG CGAGATCTCA CTCAAAGAGG AAAAGGTACG CCAGAAAGAG CGTGAGGCCT ACCTGCAGAG CCAGGTGAAC GATCTTTGGC GCACCATCCC CCTGACGCCG GACACCCAAA AGCAGCAGAG CGCCCCCAAT TTTCCCGCCG AGCCCCAGGA GAATATCCTC TACTTCATCG AGAAGAATGC CCCCCTACTC GAGCCCTGGC AGAGAGAAAT AGTGCGGATC GTGCGTAAGA TGGGGCAATA TTTCTATCCT CAGAGACAGA CCCAGGTGAT GAACGAAGGA TGGGCCACCT TTTGGCACTA CACGATCCTC AACCACCTCT ACGACGAGGG GCTGGTCTCC GACCGCTTCA TGATAGAGTT TTTGAAAAAC CACACCAATG TGATCGCCCA GCCAAGCTAT AACAGCCCCT ACTACTCAGG CATCAACCCC TATGCGCTGG GCTTTAACAT GTTTGTCGAC ATTCGCCGCA TCTGCGAGTC GCCCACCGAA GAGGATAAAC GTTGGTTTCC CGATATCGCC GGCAGAAACT GGCTCGATAC CCTGCACTTC GCCATGGAAA ACTTTAAAGA CGAGAGCTTT ATCAGCCAAT ATATGTCGCC TAACATCATT CGCCAGTTCA AGTTTTTCAG TATTCTGGAC GATGACAAGA AAAACTATCT CAGTATTTCG GAGATCCATG ACGATCTGGG TTACCAGGAG ATCCGCCAAA CACTGTCCCA GCAGTACAAT CTGTCTAACC TTGAGCCCAA CATTCAGGTG CAGAGCGTTG CCATCTCTGG CGATCGCTCG TTGACGCTGC GCTACATCCC CATCAATCGC ATTCCATTGG ATAAGAGCTG CCAGCAAGTG GTCAAACACC TACACAGGCT CTGGGGCTTT AATGTTACCT TGGAAGAGAT TAACGATCAG GGCGAGCCTA TCGTGATTGC CAGTTGTCCG GAAAAGCTCT CGGAATCTGA TCCTGCGGCA TAG
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Protein sequence | MSSKKKRTVL NDGPDWTFEL LESYLTEIER VADHYRLDTY KNQIEVITAE QMMDAYAGIG MPIGYTHWSF GKKFIETEQG YKRGQMGLAY EIVINSDPCI AYLMEENTIT MQALVMAHAC FGHNSFFKSN YLFKTWTDAS SIIDYLVFAK NYVRECEERY GEEQVELVLD SCHALMNYGV DRYKRPSEIS LKEEKVRQKE REAYLQSQVN DLWRTIPLTP DTQKQQSAPN FPAEPQENIL YFIEKNAPLL EPWQREIVRI VRKMGQYFYP QRQTQVMNEG WATFWHYTIL NHLYDEGLVS DRFMIEFLKN HTNVIAQPSY NSPYYSGINP YALGFNMFVD IRRICESPTE EDKRWFPDIA GRNWLDTLHF AMENFKDESF ISQYMSPNII RQFKFFSILD DDKKNYLSIS EIHDDLGYQE IRQTLSQQYN LSNLEPNIQV QSVAISGDRS LTLRYIPINR IPLDKSCQQV VKHLHRLWGF NVTLEEINDQ GEPIVIASCP EKLSESDPAA
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