| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1814 |
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| Symbol | |
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| ID | 4924377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2085401 |
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| End bp | 2087320 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163379 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_001093939 |
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| Protein GI | 127512742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000485056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCTGG TTCGTATTAA TAACGGCTCA TTGGCCTATG GCTACACCCC CTTATTGCAA
AACGCCGACT TTACCATAGA GCCGGGCGAG CGCGTCTGTA TCGTGGGCCG TAACGGCGCC
GGTAAATCGA GCCTGATGAA GGTGATTGGC GGTGAGGTGT TACTTGACGA TGGCGAGTTT
AACATTGCGA ACGACGTTAA GGTTAGCAGA CTGCAACAGG ACCCACCTAA GGCTGAGCAG
GGCACGGTTT ACGCCTATAT CTCGGCGGGT TTGCAGGAGG TGGGCGAGAA GCTCGAGCGT
TATCATCAGC TGTCTCACGA TGTTGCCCAC GTTGACGCCC AGGAGATGGA GCGCCTGCTC
AAGCAGATGG AACGTCTTCA ATCGGATCTC GACCATCTCA ACGGCTGGCA GCTCGATACC
CGCATCAATC AGACCTGTGA GTTGCTGGGA TTGGACGCAG ATGCGAGCCT GGCTAGTCTG
TCTGGCGGCT GGCAGCGTAA GGTGGCCCTG GCGCGCGCCC TGGTGAGCGA GCCGGATCTG
CTGCTGCTCG ACGAGCCTAC CAACCATCTG GATATCGACA CTATCGAATG GCTGGAAGAG
TTTCTGCTTA ATTATCGCGG CGCCATCGTC TTTATCAGTC ACGACCGTGG CTTCATTCAG
CGCATGGCGA CCCGTATCGT GGATCTCGAC CGAGGTGTGG TGACCTCCTG GCCCGGTGAT
TACCAGACCT ACCTAGATGG CAAGGCCGAA TGGCTTAGGG TAGAAGAGGA GAAGAACGCT
CAGTTCGATA AGAAGCTTGC AGAAGAGGAA GCCTGGATCC GCCAAGGGAT CAAGGCGCGC
CGTACCCGTA ACGAAGGCCG CGTGCGCGCG CTTAAAGCGC TGCGTATGGA GCGTATGGAA
CGTATCAATC GTCAGGGCGG CGCTAAGATG GCTGTGGCCG ATACCGAGCG CTCGGGTAAG
CTGGTATTTG ATATCAAAGA TCTCAACTAC AACCTGCCAG ATAAGAACCT GGTGAAGAAT
TTCACCACCT CTGTGATGCG CGGCGATCGT ATCGCCCTCA TCGGCCCTAA CGGCTGTGGC
AAGTCGACTC TGATCAAGCT GTTGATTGGT CAGCTTGCGC CTCAATCCGG CGAGGTGAAG
GTGGGCACTA AGTTAGAAGT GGCCTATTTT GACCAATACC GTGAGGCGCT TGATCCGGAA
AAAACCGTTG AAGACAATGT AGGTGAAGGC AAGAAGACGG TGACTATCAA TGGTCAGGAT
AGGCATATCT TAAGCTACCT GCAGGACTTT CTGTTTTCAC CCATGCGCGC CCGTACGCCG
GTGAAGGCTC TTTCCGGTGG TGAGAAGAAT AGATTGTTGC TGGCGCGTCT GCTGCTAAGG
CCAGCAAACC TGATCATTCT CGATGAACCG ACAAACGATC TTGATATCGA GACCTTAGAG
TTGCTAGAGT CGCTGTTGAC CGATTATCAA GGCACCTTGC TATTGGTGAG TCACGATCGT
GCCTTTATCG ATAACACGGT TACCAGCTCC TGGTGGTTTA CCGGTAACGG CGGCTGGAGT
GAATATGTCG GCGGTTATCA AGATGCCGTA TCCCAGGGGG CAAAATTTTA TTCTGAGGAA
CCAGTTGCCA AGGACGCTGT CCAACCCAAG GTTGCCGAAC CGGTTAAGCG CGAAACCAAG
GCGGCCGCTA AAGCAGAGAA GAAACTTTCT TATAAATTAC AGAGAGAACT CGATGCCTTG
CCTGCCAAGA TGGAACAACT CGAAGCCGAG ATTGAAAGCT TGCAGGCAGT TATCAATGAG
CCCGATTTTT ATACTCAAGC ACAAGATCTG GTCAGTAGCC GATTAAATGA ATTGGCAGAG
CTGGAACAGG AATTAGAAGT GTGTTTCGAA CGTTGGGAAG AGCTAGAAGC CCTCAAATAG
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| Protein sequence | MSLVRINNGS LAYGYTPLLQ NADFTIEPGE RVCIVGRNGA GKSSLMKVIG GEVLLDDGEF
NIANDVKVSR LQQDPPKAEQ GTVYAYISAG LQEVGEKLER YHQLSHDVAH VDAQEMERLL
KQMERLQSDL DHLNGWQLDT RINQTCELLG LDADASLASL SGGWQRKVAL ARALVSEPDL
LLLDEPTNHL DIDTIEWLEE FLLNYRGAIV FISHDRGFIQ RMATRIVDLD RGVVTSWPGD
YQTYLDGKAE WLRVEEEKNA QFDKKLAEEE AWIRQGIKAR RTRNEGRVRA LKALRMERME
RINRQGGAKM AVADTERSGK LVFDIKDLNY NLPDKNLVKN FTTSVMRGDR IALIGPNGCG
KSTLIKLLIG QLAPQSGEVK VGTKLEVAYF DQYREALDPE KTVEDNVGEG KKTVTINGQD
RHILSYLQDF LFSPMRARTP VKALSGGEKN RLLLARLLLR PANLIILDEP TNDLDIETLE
LLESLLTDYQ GTLLLVSHDR AFIDNTVTSS WWFTGNGGWS EYVGGYQDAV SQGAKFYSEE
PVAKDAVQPK VAEPVKRETK AAAKAEKKLS YKLQRELDAL PAKMEQLEAE IESLQAVINE
PDFYTQAQDL VSSRLNELAE LEQELEVCFE RWEELEALK
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