| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1800 |
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| Symbol | |
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| ID | 4924297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2060893 |
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| End bp | 2061351 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163361 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_001093925 |
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| Protein GI | 127512728 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0430664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACAC CTTGTTATAC GACGCTTACC CGTCAAGTTG AAGCCCTGTT TAGCGGCGAA
GATAATCTCG TTACTGCGAT GGCGAACTTC TCGGCGCTGC TTAACGAGCA TCTGGATGAT
ATTAACTGGG TTGGCTTCTA TATGCTGCAA GGTGAACAAC TGGTTCTGGG CCCCTTCCAA
GGGAAAGTGG CCTGTACCCG TATCCCTATG GGTAAAGGGG TTTGCGGCAC CGCGGCCCAG
AGCAACACCA CTCAGCGCAT TGCCGATGTC CATGCCTTCG ACGGCCATAT CGCCTGCGAT
GCCGCCAGTA ACTCGGAAAT TGTGATCCCG CTGCGGCGCG ACGGTCAGGT GATCGGCGTG
CTCGATATCG ATAGTCCCTC ATTCTCTCGT TTCGACGAGG CGGATCAATT GGGGCTAGAG
TCCTGCGTAA AAAGTCTGGA AAAGGCTTTA TTTGCTTAA
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| Protein sequence | MSTPCYTTLT RQVEALFSGE DNLVTAMANF SALLNEHLDD INWVGFYMLQ GEQLVLGPFQ
GKVACTRIPM GKGVCGTAAQ SNTTQRIADV HAFDGHIACD AASNSEIVIP LRRDGQVIGV
LDIDSPSFSR FDEADQLGLE SCVKSLEKAL FA
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