| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1776 |
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| Symbol | |
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| ID | 4922702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2030291 |
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| End bp | 2032012 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163337 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_001093901 |
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| Protein GI | 127512704 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC TTTCCGGCGC CAGCATGATC GTCCGATCAT TAATCGATGA AGGCGTTAAA
CACATTTTCG GCTATCCAGG TGGCTCGGTA CTCGATATTT ACGATGCCCT GCACCAAAAA
TCCGGCATAG AACATATTCT CGTGCGACAC GAACAGGCGG CCGTACACAT GGCCGACGGC
TATGCCCGCG CCACCGGCAA GGTGGGTGTG GTACTGGTCA CCTCGGGCCC AGGCGCCACC
AACGCCATCA CGGGGATCGC CACCGCCTAC ATGGACTCAA TTCCGCTGGT CGTGCTCTCT
GGGCAGGTCC CCAGCAACCT GATAGGTAAC GATGCCTTCC AGGAATGCGA CATGATAGGT
ATCTCCCGCC CCGTGGTGAA GCACAGCTTC CTGGTGACAG ACGCCAAAGA TATTCCTGCC
ATCATCAAGA AGGCGTTTTA TATCGCCTCT ACCGGGCGTC CCGGCCCTGT GGTGGTAGAC
ATTCCCAAGG ATTGTCTCAA CCCACAGATA TTGCACGAAT ACCAATATCC GGATGAGATA
AACATGCGCT CCTATAACCC GACGACGACG GGCCATAAGG GACAGATCCG CCGCGGCCTG
CAGGCCCTGT TAAAGGCCAA GAAGCCGGTA CTCTATGTGG GCGGCGGCGC GGTGATCTCG
GGCGCAGACC AGCAGATCCT TAAACTGTCT GACAGACTCG GCCTGCCGGT GGTCAGCACC
CTAATGGGGC TGGGCGCCTT TCCCGGCACT CACGCCAACA GCGTCGGCAT GCTCGGTATG
CATGGCTGCT ATGAGGCCAA CATGGCGATG CACAACGCCG ACCTTATCTT CGGCATAGGG
GTAAGATTTG ACGATCGCAC CACCAACAAC GTGGAAAAAT ATTGCCCCAA CGCCACCATA
TTGCATATCG ATATCGACCC GTCATCCATC TCTAAGACGG TCAGGGTGGA TATCCCCATC
GTGGGCTCGG CCGATAGCGT GCTCGATGAC ATGCTGGCCC TACTTGACGA TGAGCCGTCG
ATGAAAAACG ATGAAGGCGC CATCGACTAT TGGTGGAGCG AGATCAATCA GTGGCGCAGT
CGCAACAGTC TGGCCTATGA CAAGAGCAGC GAGCGGATCA AGCCCCAGCA GGTGATAGAG
ACCCTGCACA AGCTGACCAA TGGCGATGCC TACGTGGCCT CGGACGTGGG TCAGCATCAG
ATGTTTGCCG CCCTCTACTA CCCCTTCAAC AAGCCAAGAC GCTGGATCAA CTCGGGCGGC
CTGGGCACCA TGGGCTTTGG CTTGCCAGCC GCCATGGGGG TGAAGATGGC CAAGCCGGAC
GAGACGGTTA TCTGCGTCAC CGGCGACGGC TCGATCCAGA TGAATATCCA GGAGCTGTCT
ACCGCGCTGC AATACGATAC GCCGGTTAAA ATTATCAACT TAAACAACCG TTTCCTCGGT
ATGGTGAAGC AGTGGCAGGA TATGATCTAC TCGGGTCGTC ACTCCCACTC CTACATGGAC
TCAGTGCCTA ACTTTGCCAA GATAGCCGAG GCCTACGGCC ACGTGGGCAT GACCATCAGC
GACCCGGCCG AGCTGGAAGC CGGGCTCGAG AAGGCCCTTG CCATGAAGGA CAAGCTGGTC
TTTGTCGACA TCAGCGTCGA TGAGACGGAG CACGTCTACC CAATGCAGAT CCGCGGTGGC
GGGATGAATG AAATGTGGCT AAGCAAGACG GAGAAAAGCT AA
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| Protein sequence | MEKLSGASMI VRSLIDEGVK HIFGYPGGSV LDIYDALHQK SGIEHILVRH EQAAVHMADG
YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG
ISRPVVKHSF LVTDAKDIPA IIKKAFYIAS TGRPGPVVVD IPKDCLNPQI LHEYQYPDEI
NMRSYNPTTT GHKGQIRRGL QALLKAKKPV LYVGGGAVIS GADQQILKLS DRLGLPVVST
LMGLGAFPGT HANSVGMLGM HGCYEANMAM HNADLIFGIG VRFDDRTTNN VEKYCPNATI
LHIDIDPSSI SKTVRVDIPI VGSADSVLDD MLALLDDEPS MKNDEGAIDY WWSEINQWRS
RNSLAYDKSS ERIKPQQVIE TLHKLTNGDA YVASDVGQHQ MFAALYYPFN KPRRWINSGG
LGTMGFGLPA AMGVKMAKPD ETVICVTGDG SIQMNIQELS TALQYDTPVK IINLNNRFLG
MVKQWQDMIY SGRHSHSYMD SVPNFAKIAE AYGHVGMTIS DPAELEAGLE KALAMKDKLV
FVDISVDETE HVYPMQIRGG GMNEMWLSKT EKS
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