| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1772 |
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| Symbol | |
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| ID | 4922248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2027216 |
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| End bp | 2027803 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163333 |
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| Product | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome |
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| Protein accession | YP_001093897 |
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| Protein GI | 127512700 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATA AGTTGAAAAA AATCTGGCAG GTGTTAAGAA AACCCAGCGT GCATTTTAGC
TTAGGTTTTC TTACCTTAGG CGGCTTCGTC GCGGGGGTGA TCTTCTGGGG GGGATTCAAC
ACCGCCCTGG AAGCCACCAA CCAGGAAGCC TTCTGTATAG GCTGTCACGA GATGGAAAAT
AACGTGTATC AGGAGCTAAA GTCGACGATA CACTTTACCA ACCGCAGTGG TGTGCGTGCG
ACCTGTCCGG ATTGTCACGT GCCTCACAAC TGGACAGATA AGATAGCCCG TAAGATGCAG
GCCTCGAAAG AGGTGTGGGG CAAGGTATTC GGCACCATCA ACACGCGTGA CAAGTTTGAG
GCCAAGCGCC GCGAACTGGC AGAGCATGAA TGGGCACGAC TCAAGGCCAA CGATTCGCTT
GAATGTCGTA ACTGCCACAA TTTCGACTAC ATGGACTTTA CTCGTCAATC GACACGTGCG
GCCAATATGC ACTCCACATC ATTGGCCAGC GGCGAGAAGA CCTGTATCGA TTGTCATAAG
GGTATTGCTC ACCACTTACC TGATATGAAA GGGGTCGAAG GCTTCTAG
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| Protein sequence | MLDKLKKIWQ VLRKPSVHFS LGFLTLGGFV AGVIFWGGFN TALEATNQEA FCIGCHEMEN
NVYQELKSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTRDKFE
AKRRELAEHE WARLKANDSL ECRNCHNFDY MDFTRQSTRA ANMHSTSLAS GEKTCIDCHK
GIAHHLPDMK GVEGF
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