Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1762 |
Symbol | |
ID | 4920456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2014441 |
End bp | 2015004 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640163323 |
Product | hydrogenase expression/formation protein |
Protein accession | YP_001093887 |
Protein GI | 127512690 |
COG category | [C] Energy production and conversion |
COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
TIGRFAM ID | [TIGR00072] hydrogenase maturation protease [TIGR00140] hydrogenase expression/formation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAC TGTTACTCGG TATTGGTAAT GTGCTGTACG CCGATGAAGG GATCGGCGTA CATTTTGTCA ATTACCTGCA AGAAAACTAT CGCTTTAGCC ATCCGTCGCA TCAACTCGAT GTGATGGATG GTGGCACCTT AGCCCAAGGG CTAATTCCCA TTATCTGTAA ATACGACTAT CTTGTGGTGG TAGATACAGT CAACGCCCAC GGCGTCGGAC CAGGAGAGGT CTATTTTTTC GATTTCGACA AGGCTCCCTG CGAGATCGAT TGGCAAGGAA GCGCACACGA GGTGGAGATG TTACAGACAT TGACCATGAT GGAGATGGTC GGAGACAGAC CAAAAACTTT CGTACTTGGC TGCACGCCAA CCGTACTCGA ACCTATGACA CTGGGGCTCA CCCCGCGTGT CGCCGCCGCC GTTCCCCTGA TGGAAACGAC AATACTCACC CATTTCAAGT CCCTCGGATT CGAGATCGAA CGGATCAACG ACTTGGCTAT TGAAACGCTC ATTCCAGATT CTTATAAGCG CGGTGTAACC CTAGATGAAG ACAATCAAAT TTGA
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Protein sequence | MKILLLGIGN VLYADEGIGV HFVNYLQENY RFSHPSHQLD VMDGGTLAQG LIPIICKYDY LVVVDTVNAH GVGPGEVYFF DFDKAPCEID WQGSAHEVEM LQTLTMMEMV GDRPKTFVLG CTPTVLEPMT LGLTPRVAAA VPLMETTILT HFKSLGFEIE RINDLAIETL IPDSYKRGVT LDEDNQI
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