Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1740 |
Symbol | |
ID | 4923933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1990663 |
End bp | 1991211 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640163302 |
Product | nitroreductase |
Protein accession | YP_001093866 |
Protein GI | 127512669 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCGA TCGAACTTCT GTTGACACGG CAGTCTTGCC CCAGACTAGT CGCCCCGGCG CCCGATGCGG CGCAGCTTAC ACAGATCTTA AACGCCGCGG TGCGAGTGCC GGACCATGCA GGCCTCACCC CGTGGGAATT TATCGTCGCC GAGGGCGATG GCCTAACGCG CCTTGCTGAC CATTTTGTGG AGGCGATGGA AAAGGAGGGT GGCGATGAGG CTGCCGTCGC TAAGGCCGCC AACATGCCGA TGCGCGCCCC CATGGTGGTC ACTGTAGTGG CCAAGGTAAC CGAGCATCCT AAGGTGCCGG TACTCGAGCA GCATATCGCC GCGGGCTGCG CCTGTATGGC GATGCAGCAG GCCGCCTTCG CTCTTGGACT GGGCGGCATC TGGCGCACCG GCCCCTTGGC CTTTAATCGT CATCTGCATC GGGCCTTGGG CCTGGGCGAG CAAGATCAGA TAGTGGGCTT CCTCTACCTG GGCACGCCCG CGGTGAAGGC GCCGTTAAAG CCGCAGAAAT CGGCCGACTC GGCGGTGCGT TACCTCTGA
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Protein sequence | MDAIELLLTR QSCPRLVAPA PDAAQLTQIL NAAVRVPDHA GLTPWEFIVA EGDGLTRLAD HFVEAMEKEG GDEAAVAKAA NMPMRAPMVV TVVAKVTEHP KVPVLEQHIA AGCACMAMQQ AAFALGLGGI WRTGPLAFNR HLHRALGLGE QDQIVGFLYL GTPAVKAPLK PQKSADSAVR YL
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