| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1733 |
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| Symbol | |
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| ID | 4923677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1984164 |
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| End bp | 1984628 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163295 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001093859 |
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| Protein GI | 127512662 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.240519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATGG TCACGCCAGA AGCCAATCAG GCATTAAACG TTAAAGATAT CGTTAAGAAG
GCCACGGAGC TGAACGATTT TGGTCACCTG CTGGCGCATG TTCCTTATGC TAAGTTTATC
GGCATGCAGG TGGCGCGCTT CGGCGACGAG CTGGTGTTTC AGCTACCGAA GAAAGATGAA
AATATCGGTA ACCCAACCCT GCCGGCCATT CATGGCGGTG TGATCGCGGG ATTTATGGAG
ATGTCGGCGA TCGTTCAGCT GATGGTGTTC ATGCAGACCA CTAAGGTGCC CAAAATCGTC
GATTTCTCAA TCGATTACCT GAGGGCTGGC CACCACAGAG ATAGCTTCGC CGAGTGTAAG
ATCACCCGTC AGGGACGCCG CGTGGCGAAC GTAAACATCA ACTGCTGGCA AACCAACCGT
AAGGCCTTGA TTGCCACCGC CCGTGCCCAT TTTCTGATCG AATAG
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| Protein sequence | MTMVTPEANQ ALNVKDIVKK ATELNDFGHL LAHVPYAKFI GMQVARFGDE LVFQLPKKDE
NIGNPTLPAI HGGVIAGFME MSAIVQLMVF MQTTKVPKIV DFSIDYLRAG HHRDSFAECK
ITRQGRRVAN VNINCWQTNR KALIATARAH FLIE
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