Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1723 |
Symbol | |
ID | 4922838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1977199 |
End bp | 1978062 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163285 |
Product | heat shock protein HtpX |
Protein accession | YP_001093849 |
Protein GI | 127512652 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000457651 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTA TTTTCTTATT GATCGCGACA AACATGGCAA TCTTGCTGGT CGCTTCAATT GTGATGTCTA TTTTAGGGGT TAACACCTCG ACCATGGGCG GACTATTGGT CTTTGCCGCC ATCTTCGGTT TCGGCGGCGC CTTTATCAGC TTAGCGATCT CTAAGTGGAT GGCGAAGAAG ACCATGGGCT GTGAAGTGAT CACCACACCG CGCGACAACA TGGAGCGCTG GTTGGTCGAT ACCGTTGCGC GTCAGGCTGA GCAGGCGGGC ATCAAGATGC CTGAGGTGGC CATCTACCAG TCACCCGAGC TGAACGCCTT TGCCACAGGC CCTAGCAAGG ACAACTCGCT GGTCGCCGTC AGTAGCGGAC TGCTTTACGG CATGACGCAA GATGAGATCG AAGGCGTATT GGCCCACGAA GTGAGCCATG TGGCCAACGG CGACATGGTG ACTCTGACGC TTATTCAAGG CGTGGTGAAC ACCTTCGTGA TCTTTGCGGC CCGCGTGGTG GCGAGCATTA TCGATAACTT CGTTGCCAGC AACGACGAAG AGGGCGAAGG CCTGGGCATG TTTGCCTACA TGGCAGTGGT CTTCGTGTTG GATATGCTGT TTGGTATCCT GGCCTCGATG ATAGTGGCTT ACTTCTCACG TGTTCGTGAG TTCAAGGCCG ATGCCGGCGG CGCTCAGTTG GCAGGCAAGC ATAAGATGAT TGCGGCGCTG GACAGATTGC GTCAAGGCCC AGAAACCGGT GCCATGCCAG CACAGATGGC GGCTTTCGGT ATCAATGGTA AGAAGTCGAT GGCCGAACTG ATGATGAGCC ATCCACCACT TGAAAAGCGT ATCGAAGCAC TGCGCGCACA ATAA
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Protein sequence | MKRIFLLIAT NMAILLVASI VMSILGVNTS TMGGLLVFAA IFGFGGAFIS LAISKWMAKK TMGCEVITTP RDNMERWLVD TVARQAEQAG IKMPEVAIYQ SPELNAFATG PSKDNSLVAV SSGLLYGMTQ DEIEGVLAHE VSHVANGDMV TLTLIQGVVN TFVIFAARVV ASIIDNFVAS NDEEGEGLGM FAYMAVVFVL DMLFGILASM IVAYFSRVRE FKADAGGAQL AGKHKMIAAL DRLRQGPETG AMPAQMAAFG INGKKSMAEL MMSHPPLEKR IEALRAQ
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