Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1721 |
Symbol | |
ID | 4922998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1975224 |
End bp | 1976153 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163283 |
Product | methyltransferase type 11 |
Protein accession | YP_001093847 |
Protein GI | 127512650 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0157757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCA AGATGCCAAG CCTAACGCCC AGTTCATTGT CAAGCCTAAT ACCCAGTTCA GTGCCAAGTG AAGTGCAGAA TGTGCAGGGT AAAGACTGTA TGAAAGAGGC GATTGGTGCA GATAAGATAG CGCGGCAGTT CTCCCAGGCG GCTAAGCACT ATCAGGAGCA TGACAAGGTG CAGCGTCTCA GCGCGCAGAG GCTGAGGACC AAGATGACGC CCATCGGACG TTTGTTAGAT ATCGGTTGTG GTCCAGGTAC AGATTTTTCC GCGGCGCCAG GTCTTAATGA GGTGCTGGGG CTGGATATCG CCCCCGGCAT GCTATCGCAG ATGCTCGAAA GTTTTCCTAG CTACAAGGCG CTGTGCGGCG ATGCCCAGGC GTTGCCCCTA TCAGATGCCA GCATAGACAC CCTCTACTCA AACCTAGCGC TGCAGTGGTG CAGCGATATC AAGACGGCCA TAGGTGAGCT TGCCAGGGTG CTTAAGCCCG GCAGTCAATG CCATCTCGCC ATCGTCGTCG ATGGTAGCCT TTCTGAGCTC GACGCGCTCG GGCTAAGGGT TAATGCCTTC GAGCAAGCCC AGACGCTGCT TGATGGGTTC AGTGATAGCC ATTGGCAAAT TGAACACCAT TCGGTGGAGC CGCTGCGGGT GCATTTCGAC GATCTTAAGA CGCTGCTCTA TTCCATCAAG GGGGTTGGCG CCTCTGCCGC TATGGGAAGC GATGTCTCTC AAGGCTCAGA TGTCACTCAG GACTCAGATG CCTCCCACGG CCCAGATGAT ACCCAGGGCT CAGTGAGTAA GCCGCCACCT AGGCTTCGTG GGCGTCAGGA TTGGTTGGCC CTCTGTGAGC GCGCCGAAAA AATGCGTCAG CCAGAGGGAC TTCCCTTGAC CTATCAAATC TTATTTATTC ATGCGAGCCG CAGAGGCTAG
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Protein sequence | MSIKMPSLTP SSLSSLIPSS VPSEVQNVQG KDCMKEAIGA DKIARQFSQA AKHYQEHDKV QRLSAQRLRT KMTPIGRLLD IGCGPGTDFS AAPGLNEVLG LDIAPGMLSQ MLESFPSYKA LCGDAQALPL SDASIDTLYS NLALQWCSDI KTAIGELARV LKPGSQCHLA IVVDGSLSEL DALGLRVNAF EQAQTLLDGF SDSHWQIEHH SVEPLRVHFD DLKTLLYSIK GVGASAAMGS DVSQGSDVTQ DSDASHGPDD TQGSVSKPPP RLRGRQDWLA LCERAEKMRQ PEGLPLTYQI LFIHASRRG
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