| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1701 |
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| Symbol | |
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| ID | 4920836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1956389 |
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| End bp | 1957090 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163263 |
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| Product | transcriptional regulator PhoU |
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| Protein accession | YP_001093827 |
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| Protein GI | 127512630 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.892682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAACA TGAACTTAAA TAAACATATC TCGGGTCAGT TCAATGCCGA GCTCGACGAT
ATTCGTAACC GCGTATTGGC GATGGGTGGC CTGGTTGAGC GTCAACTGGA GCAGGCCCTG
GACGCCCTGG GTAACCTGGA TGCCGATCTG GCGCAGAAGG TGATTGACGG TGACCACAGC
GTCAATGGTA TGGAGGTCTC TATCGATGAG GAGTGTACCC GTATCATCGC CAAGCGTCAG
CCTGCCGCCA GCGACTTACG TCTGATCATC GCCATCTCTA AGACGATTGC CGACCTTGAA
CGTATCGGCG ATGCCTGCGT GAAGATCGCC GCCGCGGCGC TGGATAAGCG TCTCAAGAAC
CAGCAGCCTC TGTTGGTGAG CATAGAGCAT ATGGGCCGTC ACGCGACCCG CACTCTGCAC
TCGACCCTGG ATGCGCTGGC GCGTATGGAC GCCGACGTGG CCATCGAGCT GCATAAAGAA
GATAGCAAGC TAGATAGCGA ATACGAGGGT ATTATCCGCC AGCTGATGAC CTACATGATG
GAAGATCCTC GCTCTATCCC AGAAGTGCTC GACGTACTCT GGGCAGCGCG AGCGGTCGAG
CGCGTGGGCG ACAGATGCCA GAACATCTGC GAATACATCA TCTACTATGT TAAGGGTAAG
GACGTACGTC ACACCTCTTA TGAAGAGATG AAGCAGATCT AA
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| Protein sequence | MENMNLNKHI SGQFNAELDD IRNRVLAMGG LVERQLEQAL DALGNLDADL AQKVIDGDHS
VNGMEVSIDE ECTRIIAKRQ PAASDLRLII AISKTIADLE RIGDACVKIA AAALDKRLKN
QQPLLVSIEH MGRHATRTLH STLDALARMD ADVAIELHKE DSKLDSEYEG IIRQLMTYMM
EDPRSIPEVL DVLWAARAVE RVGDRCQNIC EYIIYYVKGK DVRHTSYEEM KQI
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