| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1656 |
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| Symbol | |
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| ID | 4920807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1905122 |
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| End bp | 1906312 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163218 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001093782 |
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| Protein GI | 127512585 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.251686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.752812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCG AAATTAAGGT ACCCGTACTG CCAGAATCAG TTGCTGATGC AACCATCGCC
ACATGGCATG TTAAAGCTGG CGAGCAAGTG TCTCGTGATC AAAACCTGGT CGATATCGAA
ACCGACAAGG TGGTTCTAGA AGTGGTTGCG CCGGAAGATG GTTCAATCGT TGAGTTCCTG
GCGGAAGAGG GCGACACAGT GTTGGCCGAA GCCGTCATCG CTAAGTTTGT TGCTGGTGCG
GTTGCCGGTC AGGAAGTCTC TAAAGAGCAA GCCGAAGCGG CAGCACCGCA AGCGGAAGCT
ACTAGCGAAG AGTCTAACGA TGCCCTGAGC CCATCTGTAC GTCGTCTGAT TGCCGAGCAC
AACCTGGATG CCGCTAAGAT CAAGGGCACT GGCGTTGGCG GTCGTATCAC TAAAGAAGAT
GTGGAAGCCT TCATCAAGTC AGCGCCTGCT GCTAAAGCAG CGGCGCCAGC CGTTGTTGCG
CCGCTAGGTG AGCGTAGCCA GAAGCGCGTA CCTATGACGC GTCTACGTAA GACTATCGCT
AACCGTCTGC TGGAAGCAAA GAACTCAACC GCTATGCTGA CCACTTTCAA CGAAGTGAAC
ATGAAGCCTA TCATGAACAT TCGTAAGCAG TATCAAGAGC TGTTCGAGAA GAAGCACGGC
ATCCGTCTTG GTTTCATGTC TTTCTACGTG AAAGCCGTGA CCGAAGCCCT GAAGCGTTTC
CCAGAAGTGA ACGCCTCTAT CGACGGTGAT GATATCGTTT ACCACAACTA CTTCGACGTG
AGCATCGCGG TTTCTACGCC TCGTGGCCTG GTAACACCAG TACTGCGTGA CACAGACACC
ATGAGCCTGG CCGACATCGA GCGTAACGTT CGTGACCTGG CTATTAAGGG CCGCGACGGT
AAGCTGACTG TTGACGACAT GACCGGCGGT AACTTCACCG TGACTAACGG CGGCGTATTT
GGCTCGCTAA TGTCTACCCC AATCCTTAAC CTGCCACAAA GCGCTATCTT GGGCATGCAT
GCCATCAAAG ATCGTCCAAT GGCGGTTAAT GGTCAGGTAG AAATTCTACC TATGATGTAC
CTAGCACTCT CTTATGACCA CCGTATCATC GATGGTCGTG AGTCTGTTGG CTTCCTGGTT
GCCATTAAGG ACTTCCTGGA AGACCCAACT CGTCTACTAT TAGACCTGTA A
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| Protein sequence | MSIEIKVPVL PESVADATIA TWHVKAGEQV SRDQNLVDIE TDKVVLEVVA PEDGSIVEFL
AEEGDTVLAE AVIAKFVAGA VAGQEVSKEQ AEAAAPQAEA TSEESNDALS PSVRRLIAEH
NLDAAKIKGT GVGGRITKED VEAFIKSAPA AKAAAPAVVA PLGERSQKRV PMTRLRKTIA
NRLLEAKNST AMLTTFNEVN MKPIMNIRKQ YQELFEKKHG IRLGFMSFYV KAVTEALKRF
PEVNASIDGD DIVYHNYFDV SIAVSTPRGL VTPVLRDTDT MSLADIERNV RDLAIKGRDG
KLTVDDMTGG NFTVTNGGVF GSLMSTPILN LPQSAILGMH AIKDRPMAVN GQVEILPMMY
LALSYDHRII DGRESVGFLV AIKDFLEDPT RLLLDL
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