| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1608 |
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| Symbol | |
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| ID | 4922054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1839098 |
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| End bp | 1840681 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163170 |
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| Product | carbohydrate kinase, FGGY |
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| Protein accession | YP_001093734 |
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| Protein GI | 127512537 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00017495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCTTAA CTTCAACTCC CGCTTCTTCT GCTAGCACGG GCGAGAATCC CTATTTTCTC
GCCCTGGACT ATGGCACCCA GAGCGTTAGG GCCTTAGTGT TCGACCGCCA GGGGCAGCTA
GTGGCTAAAC GGCAGCATGC CGTGCAGCCT TATCGTGACG GCGCACCTGG TGAGAGTGAG
CAATCGGCCG ACTATTGTTA TCGCCAACTG GTGGATGTGA TCCGCGGCCT GTTTGAGCAC
ACTCAGGTGT TGCCAAGTCA GATCAAGGGG ATGGCGTTGA CCACCCAAAG GGCCTGCACT
GTGCTGCTCG ATGACGCGGG GCAGGCGATA TCGCCTGTCT ACATGTGGTC CGACAGACGC
CTGGCGAGCG ATAATCTGCC GCCCATGGCC TGGTACTATC GTCTGGGGTT TTTCTGTATC
GGTCTCAGTC GGCGTATCGC CTATCTGCGC CGCGCGGCGA AGGTGAACTA TCTTCTAGAG
CATCAAAAAG ACAGGCTAGC TGCTGCCGAT AAGGTGGGGC TGCTTAGCGG CTACCTCATC
GGACAGATCA CCGGCAGGCT AGTTGATAGT AAGGCCTCAC AGGTCGCCTA TCTTCCCTTC
GATTATCGCC GCAAAGCCTG GGCGCATCCG CGCAGCTGGC GTTGGCAGGC GCTTGCTTGC
CGTCCATCGC AGATGGTGCC CTTGACCGCC CCGACCGATC AGTTGGGCCT GGTGAGTGAG
CATTTTGCCA AGGATTCTGG TTTAACGCCG GGCCTTGCCG TCTATGGCGC CGGTGCCGAC
AAGGCCTGTG AGGTGTACGC GGCTGGCTGC GGCGAGCAGG AGATTGCCTG CATTAGCCTT
GGCAGCGCGG CCATACTCGC CTGGGGCGGT GAGCGCTATC GCGAGGCCTA TCGTTATCTT
CCTGCTTTTC CCTCGATCGA AGCAAATGAC TATATTACCG AGATCCAGCT AGAGCGAGGC
TTCTGGCTGC TGAGCTGGCT CATCGAGCAG TTTGGCGCCC AGGATGTGAT CGAGGCTAGC
AGGCTTGGCA TCAGCCCTGA GCAGTATATC ACCCAGGCTA TTGCCAAGGT GCCTGTGGGC
GCAGATGGTC TTTTGCTGAG CCCGCTCTGG GCCCAGGGCG TTATCTATCC AGGCCCCGAG
GCGAGAGGCA GCATAGTCGG CTTTACCCCA GAGCATGGCA GGCTGCACCT GTACCGCGCC
GCCATCGAAG GGATCCTGAT GACCCTCAAA CAGGGGCTGC TTTGCCTGGA AAGACTCAAG
GGCTCACCCT TTAAGGTGGT TCGCATCACG GGCGGCGGCG CCCAGAGCGA CCTGGTAATG
CAGATGTGCG CCGATATTTT TAACCGCCCC GTGGAGCGTT TATCGCTGCA TGAAGCCTCA
GGCCTTGGCG CCGCCATGTG CTGCGCCGTG GGCGCTGGGA TCTATCCAGA TCTCGCCAGT
GCCAGAGGTC AGATGTGCCG CCTTGGCGAA AAATTCGAAC CCGAGGCTGC TCATGTGGCA
CAATATGCCC GCGTATTTAC AGCCTTCGAG GCCTTGTACC CCCAAATAAA ACCTTTCTTC
AAGAAGGTGA ACAGGCAGTA TTAA
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| Protein sequence | MTLTSTPASS ASTGENPYFL ALDYGTQSVR ALVFDRQGQL VAKRQHAVQP YRDGAPGESE
QSADYCYRQL VDVIRGLFEH TQVLPSQIKG MALTTQRACT VLLDDAGQAI SPVYMWSDRR
LASDNLPPMA WYYRLGFFCI GLSRRIAYLR RAAKVNYLLE HQKDRLAAAD KVGLLSGYLI
GQITGRLVDS KASQVAYLPF DYRRKAWAHP RSWRWQALAC RPSQMVPLTA PTDQLGLVSE
HFAKDSGLTP GLAVYGAGAD KACEVYAAGC GEQEIACISL GSAAILAWGG ERYREAYRYL
PAFPSIEAND YITEIQLERG FWLLSWLIEQ FGAQDVIEAS RLGISPEQYI TQAIAKVPVG
ADGLLLSPLW AQGVIYPGPE ARGSIVGFTP EHGRLHLYRA AIEGILMTLK QGLLCLERLK
GSPFKVVRIT GGGAQSDLVM QMCADIFNRP VERLSLHEAS GLGAAMCCAV GAGIYPDLAS
ARGQMCRLGE KFEPEAAHVA QYARVFTAFE ALYPQIKPFF KKVNRQY
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