Gene Shew_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1586 
Symbol 
ID4921168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1816343 
End bp1816714 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content51% 
IMG OID640163148 
Productdiacylglycerol kinase 
Protein accessionYP_001093712 
Protein GI127512515 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0818] Diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.376831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG AAAATAACCA CGGCATTAAA CGTATCTTCA GAGCGACAGG TTTCTCTATG 
CAAGGCCTTA AGCTTGCTTG GCAATCTGAG GCAGCCTTTC GCCAAGAGTT GATCTTGGTT
CTCTTCATGC TGCCTGTCGC ACTACTGGTA GATGTGCATA TGGTTGAACG CATCCTGCTC
ATCATGACAC TGATGATAGT CTTGATCGTC GAGTTGCTTA ACTCGGCCAT CGAGGCGGTG
GTCGACCGTA TCGGTCACGA AATCCATCCC CTAAGCGGAC AGGCAAAAGA TATCGCCTCA
GCGGCTGTCT TTATCGCCCT GGCCCTGTGT GGTATCACCT GGCTACTGAT CCTCTGGCCA
CTGGTTTTCT AA
 
Protein sequence
MKPENNHGIK RIFRATGFSM QGLKLAWQSE AAFRQELILV LFMLPVALLV DVHMVERILL 
IMTLMIVLIV ELLNSAIEAV VDRIGHEIHP LSGQAKDIAS AAVFIALALC GITWLLILWP
LVF