Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1567 |
Symbol | infA |
ID | 4923692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1799009 |
End bp | 1799227 |
Gene Length | 219 bp |
Protein Length | 72 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640163129 |
Product | translation initiation factor IF-1 |
Protein accession | YP_001093693 |
Protein GI | 127512496 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000216088 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.728764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAG AAGACAACAT TGAGATGCAA GGCACTATTC TTGAAACCTT GCCAAATACA ATGTTTCGAG TAGAGCTAGA GAATGGTCAC GTAGTAATCG CCCATATCTC AGGCAAAATG CGTAAAAACT ACATCCGTAT TCTAACGGGT GATAAGGTCA CAGTTCAGCT GACCCCTTAT GATTTGAGCA AAGGGCGCAT CGTCTTCCGT TCACGCTAA
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Protein sequence | MAKEDNIEMQ GTILETLPNT MFRVELENGH VVIAHISGKM RKNYIRILTG DKVTVQLTPY DLSKGRIVFR SR
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