| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1548 |
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| Symbol | |
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| ID | 4921438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1776462 |
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| End bp | 1777274 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640163110 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093674 |
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| Protein GI | 127512477 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000386745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGTA AAGTCTTTTA TATCTCAGAT GGGACGGCGA TCACGGCCGA GGTTTTTGGC
CATGCGGTAC TGTCTCAATT TCCAGTTGAG TTTGAAGCAC TTACTATTCC ATTTGTCGAG
ACGACTCAGA AAGCCGAGGC GGTAAAAGCA CAAATTAATG ATTGTTTTAT TACAACAGGC
GAACGACCAC TTGTGTTCCA TTCTATCGTC AAAGCCGAGA TCCGAGACAT CATCTACAGC
AGTGAGTGTA TCGACTATGA CTTCTTGAAC ACCTTCGTTG CCCCGCTTGA AGATCAGTTA
GGCGTCAAGG CGGTTCCCGT GACCCACAGG ACTCACGGCA AGGCCAATCA CAGTTATGAA
GCGCGTATCG ACGCCATCAA TTACGCCATG GAAAACGATG ACGGCCAGAC CCTTAAACAT
ATCGACAAGG CCGACATAGT GCTTCTGGGT GTATCCCGTT GCGGCAAGAC CCCCAGCAGC
CTGTATCTGT CGATGCAGTT TGGCATCAAG GCGGCTAACT ATCCCTTCAT CGAAGATGAC
ATGGACAACC TCAAGCTGCC CGAGGTGTTA AAGAAGAACA AACATAAGCT GTTTGGTTTG
ACGATCGACC CTGTGCGCCT GCATGAGATC CGTCAGAGCC GCATGGAGAA CAGCCGCTAC
TCTTCGCTGA GACAGTGCCG TATCGAGGTA AAAGAGGTAG AGATGATGTA TAAGCGCGAG
CGCATTCCCT TCGTCAATAC CACCAACCAT TCGGTTGAAG AGATCGCCAC CAAGATTCTG
GATGTCACAG GTCTGGAACG CCATATGTTC TAA
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| Protein sequence | MSRKVFYISD GTAITAEVFG HAVLSQFPVE FEALTIPFVE TTQKAEAVKA QINDCFITTG
ERPLVFHSIV KAEIRDIIYS SECIDYDFLN TFVAPLEDQL GVKAVPVTHR THGKANHSYE
ARIDAINYAM ENDDGQTLKH IDKADIVLLG VSRCGKTPSS LYLSMQFGIK AANYPFIEDD
MDNLKLPEVL KKNKHKLFGL TIDPVRLHEI RQSRMENSRY SSLRQCRIEV KEVEMMYKRE
RIPFVNTTNH SVEEIATKIL DVTGLERHMF
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