| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1505 |
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| Symbol | |
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| ID | 4924281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1727632 |
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| End bp | 1728336 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163060 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093631 |
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| Protein GI | 127512434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00250222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.876319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAAGA GTCTTATCAC TAATTTACTG GCCGCCGCGT TGGTGGTCTG TGGCTATCTT
TTTCAGCACG CTATCCTGTT TAGCATCGGC CTGTTTGCCC TGTCGGGGGC GGTAACCAAC
TGGCTGGCGA TCCACATGTT ATTCGAGAAG GTGCCCGGCC TCTACGGCAG CGGCGTGGTG
CCGGCCCGCT TCGAGGAGTT TAAGGCGGGG ATCGCCCATC TCATGATGGA GCAGTTTTTC
ACCAACGAAA ATATCGATAA GTTCCTGTCA CAGCAGGGTG GCAGCGTGGC ACACATCAAC
CTGGAGCCCG TTATCGAGAA GGTGGATATG TCGCCGGCCT TCGATGCCCT GGTGACCACG
GTTGAGCAGT CTTCATTTGG CGGCATGCTG GCCATGTTTG GCGGCACAGA GGCGATAGCT
CCGCTGAAAG AGCCATTTAT CAATAAGATG AAGGCCTCCT TGGTGGAGCT GTCCCAGAGC
GATGATTTCT ATGAGCTGCT GAAGAATGAG ATAGAGCAGC CGGATGTGTT AGCCGATCTC
AGGGCTAAGG TGAAGAGCAT AGTAGACCAG CGCCTGGCCG AACTCACGCC GCAGTTGGTG
AAAGAGATAG TGCAGGAGAT GATCAAGCAG CACCTTGGTT GGCTGGTGGT CTGGGGCGGC
GTCTTCGGCG GCCTCATAGG TCTGCTGGCG GCCTTGCTGG ACTAA
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| Protein sequence | MNKSLITNLL AAALVVCGYL FQHAILFSIG LFALSGAVTN WLAIHMLFEK VPGLYGSGVV
PARFEEFKAG IAHLMMEQFF TNENIDKFLS QQGGSVAHIN LEPVIEKVDM SPAFDALVTT
VEQSSFGGML AMFGGTEAIA PLKEPFINKM KASLVELSQS DDFYELLKNE IEQPDVLADL
RAKVKSIVDQ RLAELTPQLV KEIVQEMIKQ HLGWLVVWGG VFGGLIGLLA ALLD
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