| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1451 |
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| Symbol | |
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| ID | 4924152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1671372 |
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| End bp | 1673201 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163005 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001093577 |
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| Protein GI | 127512380 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.296009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGC GTTTCGAATC ATGGGTTTCC GCCCTACCCG ACCAGGAAGC GGTACAGCCG
CCCCGTGGGA TCTACCGGTT TTGCAGGCAT TACACGCGCG GCTTCGAGTT GCCGCTCGCA
TTAATGTCGA TACTGACTGC GCTGCTGGCG ATCCTCGAGG TCTCACTGTT TGCGTTTATG
GGCGACCTGG TGGATCTGCT CGCCAGCCAC AGCCCAGAGA CCTTGTTTGC CGAGCAGGGT
GATAAGTTAC TGCTGATGGC CGTCTTGGTG CTCGTGGTGA TCCCTGTGCT GGTGTTGCTG
CACGCCCTGG TGATCTACCA AGGACTCCTG GGTAACTACC CCATGTCAAT CCGCTGGCTC
GCCCACAGGT ATCTGCTTAA ACAGAGCATC GCCTTCTATC AGAACGATTT TGCCGGGCGC
ATCGCCACCA AGGTGATGCA GACCTCTCTG GCAGTGCGTG AGACGGTCAC TAAGCTGCTG
GATGTCTTAG TCTATATTCT GGTCTATTTC CTCTCCATGC TGGTGATCAT CGCCGATGCC
GACCTGCGCC TCATGCTGCC TATGCTGGTC TGGCTGATGA TCTATGTGGG GCTGCAATTT
TACTACCTGC CTAAGCTGAA ACAGGTCTCG ACCGAACAGG CCGACGCCCG CTCCACCATG
ACGGGACGCA TTGTCGACAG CTACACTAAC ATCGCCACTG TGAAGCTGTT TTCTCACACC
CAGAAAGAGG CTCAATATGC CAAGGAGAGC ATGACAGGCT TCCTCGATAC GGTTTATCGC
CAGATGCGTC TGGTAACCGG CATCAACGTC AGCGTGCAGG TGATTAATTA CTTACTCGCC
TTCAGCGTTG CCGCCGTCTC CATCTGGCTG TGGCGCGACA ACGCCATCAC CATAGGTGCC
ATAGCCGTGG CGGTCAGTCT CTCTCTCAGG CTCAACGGCA TGTCCCAATG GATCATGTGG
GAGATCAGCT CACTATTTGA AAATATCGGC ACGGTCGCCG ACGGCATGAA CACCCTGTCG
CGCCCCACCA GTGTGCAGGA CAGCGACAAC GCCAGCCAGC TAACCGTATC AAAGGGCGAG
ATCGCCTTTA ACCGGGTCAG CTTCCACTAC GGCGAGGCCA GCGGCGTTAT TGAAGATCTC
GATCTCAAGA TAAAACCCGG CGAGAAGGTC GGCCTGGTGG GCCGCTCGGG CGCCGGTAAG
TCCACCCTGG TGAACCTGCT GATGCGTTTT CACGACGTGG AACAAGGCAG CATCACCATA
GATGGGCAGA ACATTCGCGA AGTGGAACAA GACTCGCTGC GGGCCAACAT AGGCATGGTG
ACTCAGGATA CCTCTCTGCT GCATCGCTCC ATTCGCGACA ATATACGCTA CGGCAAGCCG
GATGCGAGCG AGGAAGAGCT GGAAAATGCG ATCCGCCAGG CCCAAGCCTA CGAATTTATT
CAAGGACTTA GCGATCCAGA GGGCAATCAT GGGCTCGATG CTCAGGTGGG CGAGCGTGGC
GTGAAACTGT CAGGCGGTCA GCGCCAGCGT ATCGCTATCG CACGAGTACT GCTAAAGAAC
GCCCCTATTC TCTTGCTGGA CGAGGCAACC TCGGCGCTGG ACTCTGAGAT AGAGGCCGCC
ATTCAGGAGA GTCTCTATCA ACTGATGGAG GGCAAGACGG TGATAGCCAT CGCCCACCGC
CTGTCGACCA TTGCCGCCAT GGACAGATTG ATCGTGTTAG ATCAGGGAAA AATCGTCGAG
CAAGGCACAC ACCAGGAACT GATCAAACAG GGTGGGATCT ACGCCCAGCT CTGGGCCCAT
CAGACAGGTG GCTTCCTCGG CATAGAGTAA
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| Protein sequence | MFKRFESWVS ALPDQEAVQP PRGIYRFCRH YTRGFELPLA LMSILTALLA ILEVSLFAFM
GDLVDLLASH SPETLFAEQG DKLLLMAVLV LVVIPVLVLL HALVIYQGLL GNYPMSIRWL
AHRYLLKQSI AFYQNDFAGR IATKVMQTSL AVRETVTKLL DVLVYILVYF LSMLVIIADA
DLRLMLPMLV WLMIYVGLQF YYLPKLKQVS TEQADARSTM TGRIVDSYTN IATVKLFSHT
QKEAQYAKES MTGFLDTVYR QMRLVTGINV SVQVINYLLA FSVAAVSIWL WRDNAITIGA
IAVAVSLSLR LNGMSQWIMW EISSLFENIG TVADGMNTLS RPTSVQDSDN ASQLTVSKGE
IAFNRVSFHY GEASGVIEDL DLKIKPGEKV GLVGRSGAGK STLVNLLMRF HDVEQGSITI
DGQNIREVEQ DSLRANIGMV TQDTSLLHRS IRDNIRYGKP DASEEELENA IRQAQAYEFI
QGLSDPEGNH GLDAQVGERG VKLSGGQRQR IAIARVLLKN APILLLDEAT SALDSEIEAA
IQESLYQLME GKTVIAIAHR LSTIAAMDRL IVLDQGKIVE QGTHQELIKQ GGIYAQLWAH
QTGGFLGIE
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