Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1434 |
Symbol | |
ID | 4921712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1648633 |
End bp | 1649553 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162973 |
Product | UTP-glucose-1-phosphate uridylyltransferase GalU |
Protein accession | YP_001093560 |
Protein GI | 127512363 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0858211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.652641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC ACAAAGTTCG CAAGGCCGTT ATTCCCGTCG CGGGTCTCGG CACTCGCATG CTTCCGGCAA CCAAGGCGAT CCCCAAGGAG ATGTTGCCCA TAGTCGATAG ACCCTTGATC CAATACGTGG TCAACGAGGC GATAGCCGCC GGGATCAATG AGATAGTCCT GGTCACCCAT GCCAGTAAGA ACTCCATCGA AAACCATTTC GACTCCAGCT TCGAGCTCGA GGCTCAGCTC GAACGCAGGG TAAAGCGTCA GCTACTGGCC GAGGTGCAGG CCATCTGCCC AAGCGACGTG ACAGTGATCA GCGTGCGCCA ATCTCAGGCC AAGGGGCTGG GCCACGCCAT CTTATGTGCC CAAAAGGTCG TGGGCGACGA GCCCTTTGCG GTCCTGCTGC CGGACGTCAT CATAGACGAT GCCAGCTGCG ATCTCAGCCG GGATAACTTG GCCGAGATGA TCAAGCTGTT TGACGAAACC GAAGTGGGCC AGATCATGGT CGAGGGCGTG CCAGAGAGCA GCGTCGACCA GTATGGTATC GCCGATGTGA ACGGCCATCA GCTGGAGGCC GGGCAATCTA AACCTATCAA TGAGTTGGTG GAGAAACCTA AGGTGGGCCA GGCGCCATCT AACTTAGCGG TAGTTGGCCG ATACGTGCTA CCTAAGCAGA TCTGGCAGCT ACTGGGCAAG ACCCCCGCCG GCGCAGGCGA TGAGATCCAA CTTACCGATG CCATCGCCAT GTTGATGAAC ACTCAAACCG TCAACGCCTA TTACATGCAT GGCAAGAGCC ATGACTGTGG CAACAAACTC GGCTACATGC GCGCCAATGT CGAATACGCG CTGCGCCATC ACGAAGTGGG CAGGGATTTT GCCGACTACC TCAAGACATT AGTTTCAGAT TTACAACAGG ATAAAGATTA A
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Protein sequence | MKQHKVRKAV IPVAGLGTRM LPATKAIPKE MLPIVDRPLI QYVVNEAIAA GINEIVLVTH ASKNSIENHF DSSFELEAQL ERRVKRQLLA EVQAICPSDV TVISVRQSQA KGLGHAILCA QKVVGDEPFA VLLPDVIIDD ASCDLSRDNL AEMIKLFDET EVGQIMVEGV PESSVDQYGI ADVNGHQLEA GQSKPINELV EKPKVGQAPS NLAVVGRYVL PKQIWQLLGK TPAGAGDEIQ LTDAIAMLMN TQTVNAYYMH GKSHDCGNKL GYMRANVEYA LRHHEVGRDF ADYLKTLVSD LQQDKD
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